Information for motif6


Reverse Opposite:

p-value:1e-14
log p-value:-3.246e+01
Information Content per bp:1.601
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif24.59%
Number of Background Sequences with motif1.6
Percentage of Background Sequences with motif2.21%
Average Position of motif in Targets24.2 +/- 11.8bp
Average Position of motif in Background30.1 +/- 6.5bp
Strand Bias (log2 ratio + to - strand density)1.1
Multiplicity (# of sites on avg that occur together)1.47
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Stat3(Stat)/mES-Stat3-ChIP-Seq(GSE11431)/Homer

Match Rank:1
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-CTCCCGGAKC
CTTCCNGGAA-

Bcl6(Zf)/Liver-Bcl6-ChIP-Seq(GSE31578)/Homer

Match Rank:2
Score:0.65
Offset:-5
Orientation:forward strand
Alignment:-----CTCCCGGAKC
NNNCTTTCCAGGAAA

MA0137.3_STAT1/Jaspar

Match Rank:3
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-CTCCCGGAKC
TTTCCTGGAAA

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:4
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:CTCCCGGAKC-
-ANCAGGATGT

POL013.1_MED-1/Jaspar

Match Rank:5
Score:0.62
Offset:4
Orientation:reverse strand
Alignment:CTCCCGGAKC
----CGGAGC

MA0028.1_ELK1/Jaspar

Match Rank:6
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:CTCCCGGAKC
CTTCCGGNNN

Stat3+il21(Stat)/CD4-Stat3-ChIP-Seq(GSE19198)/Homer

Match Rank:7
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---CTCCCGGAKC-
NNCTTCCNGGAAGN

STAT4(Stat)/CD4-Stat4-ChIP-Seq(GSE22104)/Homer

Match Rank:8
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-CTCCCGGAKC-
TTTCCNGGAAAN

MA0144.2_STAT3/Jaspar

Match Rank:9
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-CTCCCGGAKC
TTTCCCAGAAN

MA0519.1_Stat5a::Stat5b/Jaspar

Match Rank:10
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--CTCCCGGAKC
ATTTCCAAGAA-