Information for motif9


Reverse Opposite:

p-value:1e-7
log p-value:-1.717e+01
Information Content per bp:1.485
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif27.87%
Number of Background Sequences with motif4.2
Percentage of Background Sequences with motif5.91%
Average Position of motif in Targets23.3 +/- 8.9bp
Average Position of motif in Background25.5 +/- 4.3bp
Strand Bias (log2 ratio + to - strand density)0.9
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0123.1_Foxl1_2/Jaspar

Match Rank:1
Score:0.57
Offset:2
Orientation:forward strand
Alignment:WAAYADMAWAAVSAAMAMMM
--ATATCAAAACAAAACA--

PB0148.1_Mtf1_2/Jaspar

Match Rank:2
Score:0.54
Offset:2
Orientation:forward strand
Alignment:WAAYADMAWAAVSAAMAMMM
--AAATAAGAAAAAAC----

PB0093.1_Zfp105_1/Jaspar

Match Rank:3
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---WAAYADMAWAAVSAAMAMMM
AACAAACAACAAGAG--------

MA0029.1_Mecom/Jaspar

Match Rank:4
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-WAAYADMAWAAVSAAMAMMM
AAGATAAGATAACA-------

PB0182.1_Srf_2/Jaspar

Match Rank:5
Score:0.51
Offset:-2
Orientation:forward strand
Alignment:--WAAYADMAWAAVSAAMAMMM
GTTAAAAAAAAAAATTA-----

PB0120.1_Foxj1_2/Jaspar

Match Rank:6
Score:0.51
Offset:2
Orientation:forward strand
Alignment:WAAYADMAWAAVSAAMAMMM
--ATGTCACAACAACAC---

PB0119.1_Foxa2_2/Jaspar

Match Rank:7
Score:0.51
Offset:-2
Orientation:forward strand
Alignment:--WAAYADMAWAAVSAAMAMMM
AAAAATAACAAACGG-------

PB0122.1_Foxk1_2/Jaspar

Match Rank:8
Score:0.50
Offset:-1
Orientation:forward strand
Alignment:-WAAYADMAWAAVSAAMAMMM
CAAACAACAACACCT------

MA0481.1_FOXP1/Jaspar

Match Rank:9
Score:0.49
Offset:2
Orientation:forward strand
Alignment:WAAYADMAWAAVSAAMAMMM
--CAAAAGTAAACAAAG---

PB0141.1_Isgf3g_2/Jaspar

Match Rank:10
Score:0.49
Offset:0
Orientation:forward strand
Alignment:WAAYADMAWAAVSAAMAMMM
GCAAAACATTACTA------