Information for motif1


Reverse Opposite:

p-value:1e-485
log p-value:-1.118e+03
Information Content per bp:1.973
Number of Target Sequences with motif489.0
Percentage of Target Sequences with motif21.71%
Number of Background Sequences with motif1.0
Percentage of Background Sequences with motif0.96%
Average Position of motif in Targets25.4 +/- 12.0bp
Average Position of motif in Background13.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.11
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0133.1_Hic1_2/Jaspar

Match Rank:1
Score:0.72
Offset:-1
Orientation:forward strand
Alignment:-GACATGCCCA-----
GGGTGTGCCCAAAAGG

p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:2
Score:0.65
Offset:1
Orientation:forward strand
Alignment:GACATGCCCA-----
-ACATGCCCGGGCAT

MA0106.2_TP53/Jaspar

Match Rank:3
Score:0.65
Offset:1
Orientation:forward strand
Alignment:GACATGCCCA------
-ACATGCCCAGACATG

KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer

Match Rank:4
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:GACATGCCCA
GCCMCRCCCH

Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer

Match Rank:5
Score:0.61
Offset:0
Orientation:forward strand
Alignment:GACATGCCCA
GCCACACCCA

NFkB-p65-Rel(RHD)/LPS-exp(GSE23622)/Homer

Match Rank:6
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-GACATGCCCA
GGAAATTCCC-

PB0180.1_Sp4_2/Jaspar

Match Rank:7
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---GACATGCCCA--
NNGGCCACGCCTTTN

MA0525.1_TP63/Jaspar

Match Rank:8
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-GACATGCCCA---------
AGACATGCCCAGACATGCCC

TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer

Match Rank:9
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:GACATGCCCA-
-RCATTCCWGG

MA0597.1_THAP1/Jaspar

Match Rank:10
Score:0.58
Offset:3
Orientation:forward strand
Alignment:GACATGCCCA--
---CTGCCCGCA