Information for motif12


Reverse Opposite:

p-value:1e-20
log p-value:-4.765e+01
Information Content per bp:1.530
Number of Target Sequences with motif78.0
Percentage of Target Sequences with motif3.46%
Number of Background Sequences with motif1.0
Percentage of Background Sequences with motif0.96%
Average Position of motif in Targets24.1 +/- 11.4bp
Average Position of motif in Background34.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0044.1_Homez/Jaspar

Match Rank:1
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--GAAAAACGCT-----
NNTAAAAACGATGTTNT

MA0152.1_NFATC2/Jaspar

Match Rank:2
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--GAAAAACGCT
TGGAAAA-----

PB0141.1_Isgf3g_2/Jaspar

Match Rank:3
Score:0.58
Offset:0
Orientation:forward strand
Alignment:GAAAAACGCT----
GCAAAACATTACTA

PB0042.1_Mafk_1/Jaspar

Match Rank:4
Score:0.56
Offset:0
Orientation:forward strand
Alignment:GAAAAACGCT-----
TAAAAATGCTGACTT

MF0003.1_REL_class/Jaspar

Match Rank:5
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-GAAAAACGCT
GGAAATCCCC-

PB0148.1_Mtf1_2/Jaspar

Match Rank:6
Score:0.56
Offset:-6
Orientation:forward strand
Alignment:------GAAAAACGCT
AAATAAGAAAAAAC--

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:7
Score:0.56
Offset:-5
Orientation:forward strand
Alignment:-----GAAAAACGCT
TACTGGAAAAAAAA-

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma et al.)/Homer

Match Rank:8
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----GAAAAACGCT
AATGGAAAAT----

PB0146.1_Mafk_2/Jaspar

Match Rank:9
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--GAAAAACGCT---
GAAAAAATTGCAAGG

POL007.1_BREd/Jaspar

Match Rank:10
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:GAAAAACGCT
NANANAC---