Information for motif17


Reverse Opposite:

p-value:1e-14
log p-value:-3.274e+01
Information Content per bp:1.702
Number of Target Sequences with motif102.0
Percentage of Target Sequences with motif4.53%
Number of Background Sequences with motif2.2
Percentage of Background Sequences with motif2.06%
Average Position of motif in Targets23.1 +/- 11.3bp
Average Position of motif in Background11.2 +/- 2.4bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.01
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

BMYB(HTH)/Hela-BMYB-ChIPSeq(GSE27030)/Homer

Match Rank:1
Score:0.58
Offset:3
Orientation:forward strand
Alignment:TTCTGAACKG---
---NHAACBGYYV

MF0009.1_TRP(MYB)_class/Jaspar

Match Rank:2
Score:0.57
Offset:5
Orientation:reverse strand
Alignment:TTCTGAACKG---
-----AACCGANA

MA0102.3_CEBPA/Jaspar

Match Rank:3
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--TTCTGAACKG
NATTGTGCAAT-

PB0178.1_Sox8_2/Jaspar

Match Rank:4
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----TTCTGAACKG
NNTNTCATGAATGT

PH0111.1_Nkx2-2/Jaspar

Match Rank:5
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--TTCTGAACKG-----
NANTTTCAAGTGGTTAN

PB0176.1_Sox5_2/Jaspar

Match Rank:6
Score:0.53
Offset:-7
Orientation:reverse strand
Alignment:-------TTCTGAACKG
NNCTNAATTATGANN--

POL002.1_INR/Jaspar

Match Rank:7
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--TTCTGAACKG
NNNANTGA----

PB0145.1_Mafb_2/Jaspar

Match Rank:8
Score:0.52
Offset:-4
Orientation:reverse strand
Alignment:----TTCTGAACKG-
ANATTTTTGCAANTN

MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer

Match Rank:9
Score:0.52
Offset:4
Orientation:reverse strand
Alignment:TTCTGAACKG--
----YAACBGCC

AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer

Match Rank:10
Score:0.52
Offset:3
Orientation:reverse strand
Alignment:TTCTGAACKG---
---CCAACTGCCA