Information for motif18


Reverse Opposite:

p-value:1e-13
log p-value:-3.095e+01
Information Content per bp:1.668
Number of Target Sequences with motif100.0
Percentage of Target Sequences with motif4.44%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif2.50%
Average Position of motif in Targets24.2 +/- 12.3bp
Average Position of motif in Background33.8 +/- 12.1bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.01
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0099.1_Zfp691_1/Jaspar

Match Rank:1
Score:0.76
Offset:-5
Orientation:reverse strand
Alignment:-----GATCACTGTC--
NNNNTGAGCACTGTNNG

PB0195.1_Zbtb3_2/Jaspar

Match Rank:2
Score:0.72
Offset:-1
Orientation:forward strand
Alignment:-GATCACTGTC-----
CAATCACTGGCAGAAT

FXR(NR/IR1)/Liver-FXR-ChIP-Seq(Chong et al.)/Homer

Match Rank:3
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--GATCACTGTC--
NAGGTCANTGACCT

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:4
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-GATCACTGTC
AAATCACTGC-

MA0078.1_Sox17/Jaspar

Match Rank:5
Score:0.62
Offset:1
Orientation:forward strand
Alignment:GATCACTGTC
-CTCATTGTC

POL009.1_DCE_S_II/Jaspar

Match Rank:6
Score:0.59
Offset:4
Orientation:forward strand
Alignment:GATCACTGTC
----GCTGTG

MA0038.1_Gfi1/Jaspar

Match Rank:7
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--GATCACTGTC
CAAATCACTG--

MA0483.1_Gfi1b/Jaspar

Match Rank:8
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-GATCACTGTC
AAATCACAGCA

MA0100.2_Myb/Jaspar

Match Rank:9
Score:0.57
Offset:1
Orientation:forward strand
Alignment:GATCACTGTC-
-CCAACTGCCA

POL002.1_INR/Jaspar

Match Rank:10
Score:0.57
Offset:2
Orientation:forward strand
Alignment:GATCACTGTC
--TCAGTCTT