Information for motif2


Reverse Opposite:

p-value:1e-259
log p-value:-5.970e+02
Information Content per bp:1.988
Number of Target Sequences with motif411.0
Percentage of Target Sequences with motif18.25%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif2.52%
Average Position of motif in Targets25.7 +/- 13.0bp
Average Position of motif in Background34.9 +/- 1.6bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0152.1_NFATC2/Jaspar

Match Rank:1
Score:0.65
Offset:1
Orientation:forward strand
Alignment:CTTGTCCAGG
-TTTTCCA--

PB0200.1_Zfp187_2/Jaspar

Match Rank:2
Score:0.64
Offset:-5
Orientation:forward strand
Alignment:-----CTTGTCCAGG-
GAGCCCTTGTCCCTAA

Bcl6(Zf)/Liver-Bcl6-ChIP-Seq(GSE31578)/Homer

Match Rank:3
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--CTTGTCCAGG---
NNNCTTTCCAGGAAA

p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:4
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-CTTGTCCAGG---
ACATGCCCGGGCAT

MA0463.1_Bcl6/Jaspar

Match Rank:5
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-CTTGTCCAGG---
NGCTTTCTAGGAAN

MA0106.2_TP53/Jaspar

Match Rank:6
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-CTTGTCCAGG----
ACATGCCCAGACATG

SA0001.1_at_AC_acceptor/Jaspar

Match Rank:7
Score:0.55
Offset:-8
Orientation:forward strand
Alignment:--------CTTGTCCAGG--
TTTTTTTTTTTTTTCAGGTT

MA0078.1_Sox17/Jaspar

Match Rank:8
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---CTTGTCCAGG
CTCATTGTC----

SA0002.1_at_AC_acceptor/Jaspar

Match Rank:9
Score:0.54
Offset:-8
Orientation:forward strand
Alignment:--------CTTGTCCAGG--
TTTTTTTTTTTTTTCAGGTT

PB0160.1_Rfxdc2_2/Jaspar

Match Rank:10
Score:0.53
Offset:-4
Orientation:reverse strand
Alignment:----CTTGTCCAGG---
NTNNCGTATCCAAGTNN