Information for motif3


Reverse Opposite:

p-value:1e-122
log p-value:-2.811e+02
Information Content per bp:1.925
Number of Target Sequences with motif201.0
Percentage of Target Sequences with motif8.93%
Number of Background Sequences with motif1.0
Percentage of Background Sequences with motif0.97%
Average Position of motif in Targets25.6 +/- 9.6bp
Average Position of motif in Background23.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0106.2_TP53/Jaspar

Match Rank:1
Score:0.73
Offset:0
Orientation:forward strand
Alignment:TCTTGCCCTGACATGTTCCT
ACATGCCCAGACATG-----

p53(p53)/Saos-p53-ChIP-Seq(GSE15780)/Homer

Match Rank:2
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-TCTTGCCCTGACATGTTCCT
AACATGCCCAGACATGCCCN-

p53(p53)/Saos-p53-ChIP-Seq/Homer

Match Rank:3
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-TCTTGCCCTGACATGTTCCT
AACATGCCCAGACATGCCCN-

MA0525.1_TP63/Jaspar

Match Rank:4
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--TCTTGCCCTGACATGTTCCT
AGACATGCCCAGACATGCCC--

p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:5
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:TCTTGCCCTGACATGTTCCT
--ATGCCCGGGCATGT----

p63(p53)/Keratinocyte-p63-ChIP-Seq(GSE17611)/Homer

Match Rank:6
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-TCTTGCCCTGACATGTTCCT
NGCATGTCNNGACATGCNNN-

PB0060.1_Smad3_1/Jaspar

Match Rank:7
Score:0.54
Offset:1
Orientation:forward strand
Alignment:TCTTGCCCTGACATGTTCCT
-CAAATCCAGACATCACA--

MA0058.2_MAX/Jaspar

Match Rank:8
Score:0.53
Offset:10
Orientation:reverse strand
Alignment:TCTTGCCCTGACATGTTCCT
----------CCATGTGCTT

MA0597.1_THAP1/Jaspar

Match Rank:9
Score:0.52
Offset:2
Orientation:forward strand
Alignment:TCTTGCCCTGACATGTTCCT
--CTGCCCGCA---------

TRa(NR)/C17.2-TRa-ChIP-Seq(GSE38347)/Homer

Match Rank:10
Score:0.52
Offset:3
Orientation:reverse strand
Alignment:TCTTGCCCTGACATGTTCCT
---TGWCCTCARNTGACC--