| p-value: | 1e-88 |
| log p-value: | -2.049e+02 |
| Information Content per bp: | 1.674 |
| Number of Target Sequences with motif | 362.0 |
| Percentage of Target Sequences with motif | 16.07% |
| Number of Background Sequences with motif | 5.4 |
| Percentage of Background Sequences with motif | 5.12% |
| Average Position of motif in Targets | 24.9 +/- 13.3bp |
| Average Position of motif in Background | 34.1 +/- 10.5bp |
| Strand Bias (log2 ratio + to - strand density) | -0.2 |
| Multiplicity (# of sites on avg that occur together) | 1.06 |
| Motif File: | file (matrix)
reverse opposite |
| PDF Format Logos: | forward logo
reverse opposite |
Pax8(Paired/Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer
| Match Rank: | 1 |
| Score: | 0.71
| | Offset: | 0
| | Orientation: | reverse strand |
| Alignment: | GCAGGCATGC-----
SCAGYCADGCATGAC |
|
|
|
SD0002.1_at_AC_acceptor/Jaspar
| Match Rank: | 2 |
| Score: | 0.67
| | Offset: | 1
| | Orientation: | forward strand |
| Alignment: | GCAGGCATGC--
-AAGGCAAGTGT |
|
|
|
TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer
| Match Rank: | 3 |
| Score: | 0.65
| | Offset: | 0
| | Orientation: | forward strand |
| Alignment: | GCAGGCATGC
CCWGGAATGY |
|
|
|
ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer
| Match Rank: | 4 |
| Score: | 0.62
| | Offset: | 2
| | Orientation: | forward strand |
| Alignment: | GCAGGCATGC
--AGGCCTNG |
|
|
|
PAX5(Paired/Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer
| Match Rank: | 5 |
| Score: | 0.62
| | Offset: | 0
| | Orientation: | forward strand |
| Alignment: | GCAGGCATGC------
GCAGCCAAGCGTGACN |
|
|
|
Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer
| Match Rank: | 6 |
| Score: | 0.59
| | Offset: | 0
| | Orientation: | reverse strand |
| Alignment: | GCAGGCATGC
CCAGACRSVB |
|
|
|
Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer
| Match Rank: | 7 |
| Score: | 0.58
| | Offset: | 0
| | Orientation: | reverse strand |
| Alignment: | GCAGGCATGC
BCAGACWA-- |
|
|
|
TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer
| Match Rank: | 8 |
| Score: | 0.58
| | Offset: | 0
| | Orientation: | forward strand |
| Alignment: | GCAGGCATGC
NCTGGAATGC |
|
|
|
MA0090.1_TEAD1/Jaspar
| Match Rank: | 9 |
| Score: | 0.58
| | Offset: | -1
| | Orientation: | reverse strand |
| Alignment: | -GCAGGCATGC-
CNGAGGAATGTG |
|
|
|
Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo et al.)/Homer
| Match Rank: | 10 |
| Score: | 0.58
| | Offset: | -2
| | Orientation: | forward strand |
| Alignment: | --GCAGGCATGC
TBGCACGCAA-- |
|
|
|
