p-value: | 1e-88 |
log p-value: | -2.049e+02 |
Information Content per bp: | 1.674 |
Number of Target Sequences with motif | 362.0 |
Percentage of Target Sequences with motif | 16.07% |
Number of Background Sequences with motif | 5.4 |
Percentage of Background Sequences with motif | 5.12% |
Average Position of motif in Targets | 24.9 +/- 13.3bp |
Average Position of motif in Background | 34.1 +/- 10.5bp |
Strand Bias (log2 ratio + to - strand density) | -0.2 |
Multiplicity (# of sites on avg that occur together) | 1.06 |
Motif File: | file (matrix) reverse opposite |
PDF Format Logos: | forward logo reverse opposite |
Pax8(Paired/Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer
Match Rank: | 1 |
Score: | 0.71 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | GCAGGCATGC----- SCAGYCADGCATGAC |
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SD0002.1_at_AC_acceptor/Jaspar
Match Rank: | 2 |
Score: | 0.67 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | GCAGGCATGC-- -AAGGCAAGTGT |
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TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer
Match Rank: | 3 |
Score: | 0.65 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | GCAGGCATGC CCWGGAATGY |
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ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer
Match Rank: | 4 |
Score: | 0.62 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | GCAGGCATGC --AGGCCTNG |
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PAX5(Paired/Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer
Match Rank: | 5 |
Score: | 0.62 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | GCAGGCATGC------ GCAGCCAAGCGTGACN |
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Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer
Match Rank: | 6 |
Score: | 0.59 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | GCAGGCATGC CCAGACRSVB |
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Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer
Match Rank: | 7 |
Score: | 0.58 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | GCAGGCATGC BCAGACWA-- |
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TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer
Match Rank: | 8 |
Score: | 0.58 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | GCAGGCATGC NCTGGAATGC |
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MA0090.1_TEAD1/Jaspar
Match Rank: | 9 |
Score: | 0.58 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -GCAGGCATGC- CNGAGGAATGTG |
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Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo et al.)/Homer
Match Rank: | 10 |
Score: | 0.58 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --GCAGGCATGC TBGCACGCAA-- |
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