Information for motif6


Reverse Opposite:

p-value:1e-70
log p-value:-1.631e+02
Information Content per bp:1.530
Number of Target Sequences with motif202.0
Percentage of Target Sequences with motif8.97%
Number of Background Sequences with motif2.3
Percentage of Background Sequences with motif2.22%
Average Position of motif in Targets25.1 +/- 12.9bp
Average Position of motif in Background20.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:1
Score:0.82
Offset:0
Orientation:forward strand
Alignment:CTGTCTGGAC
CTGTCTGG--

PB0060.1_Smad3_1/Jaspar

Match Rank:2
Score:0.82
Offset:-4
Orientation:reverse strand
Alignment:----CTGTCTGGAC---
NNTNNTGTCTGGNNTNG

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.77
Offset:-2
Orientation:forward strand
Alignment:--CTGTCTGGAC
VBSYGTCTGG--

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:4
Score:0.69
Offset:0
Orientation:forward strand
Alignment:CTGTCTGGAC
TWGTCTGV--

MA0092.1_Hand1::Tcfe2a/Jaspar

Match Rank:5
Score:0.66
Offset:1
Orientation:forward strand
Alignment:CTGTCTGGAC-
-GGTCTGGCAT

MA0106.2_TP53/Jaspar

Match Rank:6
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-CTGTCTGGAC----
CATGTCTGGGCATGT

POL009.1_DCE_S_II/Jaspar

Match Rank:7
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-CTGTCTGGAC
GCTGTG-----

Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer

Match Rank:8
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-CTGTCTGGAC-
SCTGTCARCACC

MA0513.1_SMAD2::SMAD3::SMAD4/Jaspar

Match Rank:9
Score:0.54
Offset:0
Orientation:forward strand
Alignment:CTGTCTGGAC---
CTGTCTGTCACCT

PB0134.1_Hnf4a_2/Jaspar

Match Rank:10
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:CTGTCTGGAC-------
-NNATTGGACTTTNGNN