Information for motif19


Reverse Opposite:

p-value:1e-35
log p-value:-8.130e+01
Information Content per bp:1.873
Number of Target Sequences with motif104.0
Percentage of Target Sequences with motif4.62%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif1.36%
Average Position of motif in Targets27.9 +/- 12.4bp
Average Position of motif in Background34.9 +/- 6.7bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.01
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PRDM1/BMI1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-AAAGAGAAGG-
GAAAGTGAAAGT

MA0508.1_PRDM1/Jaspar

Match Rank:2
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--AAAGAGAAGG---
AGAAAGTGAAAGTGA

MA0035.3_Gata1/Jaspar

Match Rank:3
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:AAAGAGAAGG-
ANAGATAAGAA

MA0482.1_Gata4/Jaspar

Match Rank:4
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-AAAGAGAAGG
NNGAGATAAGA

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:5
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-AAAGAGAAGG-
GAAAGTGAAAGT

MA0037.2_GATA3/Jaspar

Match Rank:6
Score:0.65
Offset:2
Orientation:forward strand
Alignment:AAAGAGAAGG
--AGATAAGA

IRF2(IRF)/Erythroblas-IRF2-ChIP-Seq(GSE36985)/Homer

Match Rank:7
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-AAAGAGAAGG-
GAAASYGAAASY

Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer

Match Rank:8
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:AAAGAGAAGG-
-NAGATAAGNN

MA0050.2_IRF1/Jaspar

Match Rank:9
Score:0.64
Offset:-6
Orientation:reverse strand
Alignment:------AAAGAGAAGG-----
AAANNGAAAGTGAAAGTAAAN

Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer

Match Rank:10
Score:0.63
Offset:1
Orientation:forward strand
Alignment:AAAGAGAAGG-
-CAGATAAGGN