Information for motif2


Reverse Opposite:

p-value:1e-315
log p-value:-7.269e+02
Information Content per bp:1.916
Number of Target Sequences with motif427.0
Percentage of Target Sequences with motif18.96%
Number of Background Sequences with motif3.7
Percentage of Background Sequences with motif1.85%
Average Position of motif in Targets25.5 +/- 9.4bp
Average Position of motif in Background24.8 +/- 8.7bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.10
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:1
Score:0.72
Offset:3
Orientation:reverse strand
Alignment:TGCATGCCCGTGCATGCACA
---ATGCCCGGGCATGT---

MA0525.1_TP63/Jaspar

Match Rank:2
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-TGCATGCCCGTGCATGCACA
AGACATGCCCAGACATGCCC-

p63(p53)/Keratinocyte-p63-ChIP-Seq(GSE17611)/Homer

Match Rank:3
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:TGCATGCCCGTGCATGCACA
NGCATGTCNNGACATGCNNN

p53(p53)/Saos-p53-ChIP-Seq(GSE15780)/Homer

Match Rank:4
Score:0.69
Offset:0
Orientation:forward strand
Alignment:TGCATGCCCGTGCATGCACA
AACATGCCCAGACATGCCCN

p53(p53)/Saos-p53-ChIP-Seq/Homer

Match Rank:5
Score:0.69
Offset:0
Orientation:forward strand
Alignment:TGCATGCCCGTGCATGCACA
AACATGCCCAGACATGCCCN

MA0106.2_TP53/Jaspar

Match Rank:6
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:TGCATGCCCGTGCATGCACA
--CATGTCTGGGCATGT---

NRF1/Promoter/Homer

Match Rank:7
Score:0.55
Offset:7
Orientation:forward strand
Alignment:TGCATGCCCGTGCATGCACA
-------GTGCGCATGCGC-

NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer

Match Rank:8
Score:0.54
Offset:9
Orientation:reverse strand
Alignment:TGCATGCCCGTGCATGCACA-
---------GCGCATGCGCAG

PB0111.1_Bhlhb2_2/Jaspar

Match Rank:9
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---TGCATGCCCGTGCATGCACA
ACCGCCNTCCACGTGTANNGACA

MA0506.1_NRF1/Jaspar

Match Rank:10
Score:0.50
Offset:8
Orientation:reverse strand
Alignment:TGCATGCCCGTGCATGCACA
--------TGCGCAGGCGC-