Information for motif21


Reverse Opposite:

p-value:1e-32
log p-value:-7.497e+01
Information Content per bp:1.930
Number of Target Sequences with motif124.0
Percentage of Target Sequences with motif5.51%
Number of Background Sequences with motif3.9
Percentage of Background Sequences with motif1.96%
Average Position of motif in Targets25.2 +/- 9.5bp
Average Position of motif in Background31.6 +/- 4.3bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Ap4(HLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:1
Score:0.58
Offset:6
Orientation:reverse strand
Alignment:GCTAGGACAGCTGATTTGGA
------HCAGCTGDTN----

MyoG(HLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer

Match Rank:2
Score:0.58
Offset:5
Orientation:forward strand
Alignment:GCTAGGACAGCTGATTTGGA
-----AACAGCTG-------

MA0521.1_Tcf12/Jaspar

Match Rank:3
Score:0.56
Offset:5
Orientation:forward strand
Alignment:GCTAGGACAGCTGATTTGGA
-----AACAGCTGCAG----

MA0499.1_Myod1/Jaspar

Match Rank:4
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:GCTAGGACAGCTGATTTGGA
--NGNGACAGCTGCN-----

MA0500.1_Myog/Jaspar

Match Rank:5
Score:0.56
Offset:5
Orientation:forward strand
Alignment:GCTAGGACAGCTGATTTGGA
-----GACAGCTGCAG----

Myf5(bHLH)/GM-Myf5-ChIP-Seq(GSE24852)/Homer

Match Rank:6
Score:0.55
Offset:6
Orientation:reverse strand
Alignment:GCTAGGACAGCTGATTTGGA
------ACAGCTGTTV----

PH0170.1_Tgif2/Jaspar

Match Rank:7
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:GCTAGGACAGCTGATTTGGA
GTATTGACAGCTNNTT----

Ptf1a(HLH)/Panc1-Ptf1a-ChIP-Seq(GSE47459)/Homer

Match Rank:8
Score:0.54
Offset:6
Orientation:forward strand
Alignment:GCTAGGACAGCTGATTTGGA
------ACAGCTGTTN----

Tcf12(HLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:9
Score:0.53
Offset:6
Orientation:forward strand
Alignment:GCTAGGACAGCTGATTTGGA
------NCAGCTGCTG----

PH0102.1_Meis1/Jaspar

Match Rank:10
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:GCTAGGACAGCTGATTTGGA
NTATTGACAGCTNNTT----