Information for motif22


Reverse Opposite:

p-value:1e-25
log p-value:-5.765e+01
Information Content per bp:1.530
Number of Target Sequences with motif131.0
Percentage of Target Sequences with motif5.82%
Number of Background Sequences with motif4.1
Percentage of Background Sequences with motif2.05%
Average Position of motif in Targets23.4 +/- 12.0bp
Average Position of motif in Background29.5 +/- 4.4bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0154.2_EBF1/Jaspar

Match Rank:1
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--CCAGGAGACT
TCCCTGGGGAN-

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:2
Score:0.62
Offset:-5
Orientation:forward strand
Alignment:-----CCAGGAGACT
ATTTCCCAGVAKSCY

MA0093.2_USF1/Jaspar

Match Rank:3
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-CCAGGAGACT
GCCACGTGACC

PB0203.1_Zfp691_2/Jaspar

Match Rank:4
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---CCAGGAGACT----
NTNNNAGGAGTCTCNTN

MA0526.1_USF2/Jaspar

Match Rank:5
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-CCAGGAGACT
GTCATGTGACC

PB0147.1_Max_2/Jaspar

Match Rank:6
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---CCAGGAGACT-
GTGCCACGCGACTG

EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer

Match Rank:7
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--CCAGGAGACT
TCCCNNGGGACN

E2A-nearPU.1(HLH)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:8
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-CCAGGAGACT
NNCAGGTGNN-

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:9
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-CCAGGAGACT
ANCAGGATGT-

NPAS2(HLH)/Liver-NPAS2-ChIP-Seq(GSE39860)/Homer

Match Rank:10
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-CCAGGAGACT
KCCACGTGAC-