Information for motif23


Reverse Opposite:

p-value:1e-24
log p-value:-5.623e+01
Information Content per bp:1.671
Number of Target Sequences with motif87.0
Percentage of Target Sequences with motif3.86%
Number of Background Sequences with motif2.3
Percentage of Background Sequences with motif1.17%
Average Position of motif in Targets23.9 +/- 11.6bp
Average Position of motif in Background32.2 +/- 11.8bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer

Match Rank:1
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:CCTCCGAAGT
CCTTTGAWGT

MA0122.1_Nkx3-2/Jaspar

Match Rank:2
Score:0.57
Offset:4
Orientation:forward strand
Alignment:CCTCCGAAGT---
----TTAAGTGGA

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:3
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:CCTCCGAAGT
CCTTTGATGT

POL013.1_MED-1/Jaspar

Match Rank:4
Score:0.56
Offset:0
Orientation:forward strand
Alignment:CCTCCGAAGT
GCTCCG----

POL008.1_DCE_S_I/Jaspar

Match Rank:5
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:CCTCCGAAGT
----NGAAGC

ETS(ETS)/Promoter/Homer

Match Rank:6
Score:0.54
Offset:0
Orientation:forward strand
Alignment:CCTCCGAAGT
AACCGGAAGT

Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer

Match Rank:7
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--CCTCCGAAGT
TNCCTTTGATGT

MA0062.2_GABPA/Jaspar

Match Rank:8
Score:0.53
Offset:2
Orientation:forward strand
Alignment:CCTCCGAAGT---
--CCGGAAGTGGC

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.53
Offset:-4
Orientation:forward strand
Alignment:----CCTCCGAAGT
CNGTCCTCCC----

ELF1(ETS)/Jurkat-ELF1-ChIP-Seq(SRA014231)/Homer

Match Rank:10
Score:0.53
Offset:0
Orientation:forward strand
Alignment:CCTCCGAAGT
ANCCGGAAGT