Information for motif24


Reverse Opposite:

p-value:1e-24
log p-value:-5.615e+01
Information Content per bp:1.656
Number of Target Sequences with motif61.0
Percentage of Target Sequences with motif2.71%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.91%
Average Position of motif in Targets23.0 +/- 14.1bp
Average Position of motif in Background10.4 +/- 5.8bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:1
Score:0.77
Offset:-2
Orientation:reverse strand
Alignment:--GGTGGTTATG
NNTGTGGTTT--

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski et al.)/Homer

Match Rank:2
Score:0.76
Offset:-2
Orientation:forward strand
Alignment:--GGTGGTTATG
GCTGTGGTTT--

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:3
Score:0.76
Offset:-3
Orientation:reverse strand
Alignment:---GGTGGTTATG
NNHTGTGGTTWN-

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:4
Score:0.75
Offset:-1
Orientation:reverse strand
Alignment:-GGTGGTTATG
CTGTGGTTTN-

MA0511.1_RUNX2/Jaspar

Match Rank:5
Score:0.73
Offset:-6
Orientation:forward strand
Alignment:------GGTGGTTATG
GGGGTTTGTGGTTTG-

MA0002.2_RUNX1/Jaspar

Match Rank:6
Score:0.72
Offset:-3
Orientation:forward strand
Alignment:---GGTGGTTATG
GTCTGTGGTTT--

MA0130.1_ZNF354C/Jaspar

Match Rank:7
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:GGTGGTTATG
-GTGGAT---

PB0196.1_Zbtb7b_2/Jaspar

Match Rank:8
Score:0.69
Offset:-5
Orientation:reverse strand
Alignment:-----GGTGGTTATG--
NNANTGGTGGTCTTNNN

PH0004.1_Nkx3-2/Jaspar

Match Rank:9
Score:0.61
Offset:-7
Orientation:reverse strand
Alignment:-------GGTGGTTATG
NTNNTTAAGTGGTTANN

PB0120.1_Foxj1_2/Jaspar

Match Rank:10
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-GGTGGTTATG----
GTNTTGTTGTGANNT