p-value: | 1e-22 |
log p-value: | -5.275e+01 |
Information Content per bp: | 1.664 |
Number of Target Sequences with motif | 59.0 |
Percentage of Target Sequences with motif | 2.62% |
Number of Background Sequences with motif | 1.6 |
Percentage of Background Sequences with motif | 0.78% |
Average Position of motif in Targets | 24.4 +/- 11.5bp |
Average Position of motif in Background | 24.1 +/- 6.5bp |
Strand Bias (log2 ratio + to - strand density) | 0.6 |
Multiplicity (# of sites on avg that occur together) | 1.02 |
Motif File: | file (matrix) reverse opposite |
PDF Format Logos: | forward logo reverse opposite |
PB0048.1_Nkx3-1_1/Jaspar
Match Rank: | 1 |
Score: | 0.73 |
Offset: | -4 |
Orientation: | reverse strand |
Alignment: | ----TTAAGTAGTG--- NTNNTTAAGTGGNTNAN |
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PH0004.1_Nkx3-2/Jaspar
Match Rank: | 2 |
Score: | 0.72 |
Offset: | -4 |
Orientation: | reverse strand |
Alignment: | ----TTAAGTAGTG--- NTNNTTAAGTGGTTANN |
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MA0124.1_NKX3-1/Jaspar
Match Rank: | 3 |
Score: | 0.71 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | TTAAGTAGTG -TAAGTAT-- |
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PH0175.1_Vax2/Jaspar
Match Rank: | 4 |
Score: | 0.69 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---TTAAGTAGTG--- GNCTTAATTAGTGNNN |
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PH0117.1_Nkx3-1/Jaspar
Match Rank: | 5 |
Score: | 0.69 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---TTAAGTAGTG---- NATTTAAGTACTTANNA |
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Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer
Match Rank: | 6 |
Score: | 0.68 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | TTAAGTAGTG TTAAGTGCTT |
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PH0135.1_Phox2a/Jaspar
Match Rank: | 7 |
Score: | 0.67 |
Offset: | -5 |
Orientation: | forward strand |
Alignment: | -----TTAAGTAGTG- CAGCATTAATTAGTAG |
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Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer
Match Rank: | 8 |
Score: | 0.67 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -TTAAGTAGTG CTYRAGTGSY- |
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PH0112.1_Nkx2-3/Jaspar
Match Rank: | 9 |
Score: | 0.66 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --TTAAGTAGTG---- CTTTAAGTACTTAATG |
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PH0040.1_Hmbox1/Jaspar
Match Rank: | 10 |
Score: | 0.66 |
Offset: | -4 |
Orientation: | reverse strand |
Alignment: | ----TTAAGTAGTG--- GANGTTAACTAGTTTNN |
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