Information for motif6


Reverse Opposite:

p-value:1e-130
log p-value:-3.003e+02
Information Content per bp:1.530
Number of Target Sequences with motif214.0
Percentage of Target Sequences with motif9.50%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif1.37%
Average Position of motif in Targets24.8 +/- 12.0bp
Average Position of motif in Background11.7 +/- 5.9bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:1
Score:0.80
Offset:-1
Orientation:reverse strand
Alignment:-CTGGGAAAGC
CSTGGGAAAD-

MA0144.2_STAT3/Jaspar

Match Rank:2
Score:0.71
Offset:-3
Orientation:forward strand
Alignment:---CTGGGAAAGC
CTTCTGGGAAA--

MA0519.1_Stat5a::Stat5b/Jaspar

Match Rank:3
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--CTGGGAAAGC
TTCTTGGAAAN-

MA0137.3_STAT1/Jaspar

Match Rank:4
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---CTGGGAAAGC
TTTCCAGGAAA--

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:5
Score:0.65
Offset:-6
Orientation:reverse strand
Alignment:------CTGGGAAAGC
RGSMTBCTGGGAAAT-

MA0518.1_Stat4/Jaspar

Match Rank:6
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---CTGGGAAAGC-
TTTCCAGGAAATGG

MA0152.1_NFATC2/Jaspar

Match Rank:7
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:CTGGGAAAGC
-TGGAAAA--

MA0101.1_REL/Jaspar

Match Rank:8
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:CTGGGAAAGC---
---GGAAANCCCC

MA0105.3_NFKB1/Jaspar

Match Rank:9
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:CTGGGAAAGC---
--GGGAAATTCCC

STAT5(Stat)/mCD4+-Stat5-ChIP-Seq(GSE12346)/Homer

Match Rank:10
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----CTGGGAAAGC
NTTTCTNAGAAA--