Information for motif9


Reverse Opposite:

p-value:1e-74
log p-value:-1.704e+02
Information Content per bp:1.687
Number of Target Sequences with motif185.0
Percentage of Target Sequences with motif8.21%
Number of Background Sequences with motif3.3
Percentage of Background Sequences with motif1.65%
Average Position of motif in Targets26.1 +/- 12.7bp
Average Position of motif in Background30.1 +/- 10.3bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:1
Score:0.77
Offset:1
Orientation:forward strand
Alignment:CGGCATCTGT-
-GCCATCTGTT

Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer

Match Rank:2
Score:0.75
Offset:1
Orientation:reverse strand
Alignment:CGGCATCTGT---
-GCCAGCTGBTNB

MA0522.1_Tcf3/Jaspar

Match Rank:3
Score:0.75
Offset:0
Orientation:reverse strand
Alignment:CGGCATCTGT-
NTGCAGCTGTG

Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer

Match Rank:4
Score:0.75
Offset:1
Orientation:forward strand
Alignment:CGGCATCTGT-
-RCCATMTGTT

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:5
Score:0.73
Offset:-3
Orientation:reverse strand
Alignment:---CGGCATCTGT----
CCNNACCATCTGGCCTN

MA0521.1_Tcf12/Jaspar

Match Rank:6
Score:0.73
Offset:0
Orientation:reverse strand
Alignment:CGGCATCTGT-
NNGCAGCTGTT

MA0500.1_Myog/Jaspar

Match Rank:7
Score:0.73
Offset:0
Orientation:reverse strand
Alignment:CGGCATCTGT-
NNGCAGCTGTC

PB0003.1_Ascl2_1/Jaspar

Match Rank:8
Score:0.73
Offset:-3
Orientation:reverse strand
Alignment:---CGGCATCTGT----
NNNNAGCAGCTGCTGAN

MyoD(HLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:9
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-CGGCATCTGT-
NNAGCAGCTGCT

SCL(HLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:10
Score:0.72
Offset:1
Orientation:forward strand
Alignment:CGGCATCTGT
-ANCAGCTG-