Information for motif1


Reverse Opposite:

p-value:1e-203
log p-value:-4.684e+02
Information Content per bp:1.566
Number of Target Sequences with motif126.0
Percentage of Target Sequences with motif47.37%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif1.13%
Average Position of motif in Targets24.1 +/- 8.9bp
Average Position of motif in Background37.8 +/- 2.7bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

p53(p53)/Saos-p53-ChIP-Seq(GSE15780)/Homer

Match Rank:1
Score:0.83
Offset:3
Orientation:reverse strand
Alignment:GHNNARACATGTYYDRRCAT---
---NGGGCATGTCTGGGCATGTT

p53(p53)/Saos-p53-ChIP-Seq/Homer

Match Rank:2
Score:0.83
Offset:3
Orientation:reverse strand
Alignment:GHNNARACATGTYYDRRCAT---
---NGGGCATGTCTGGGCATGTT

MA0106.2_TP53/Jaspar

Match Rank:3
Score:0.81
Offset:6
Orientation:forward strand
Alignment:GHNNARACATGTYYDRRCAT-
------ACATGCCCAGACATG

p63(p53)/Keratinocyte-p63-ChIP-Seq(GSE17611)/Homer

Match Rank:4
Score:0.78
Offset:3
Orientation:forward strand
Alignment:GHNNARACATGTYYDRRCAT---
---NNNGCATGTCNNGACATGCN

MA0525.1_TP63/Jaspar

Match Rank:5
Score:0.75
Offset:4
Orientation:reverse strand
Alignment:GHNNARACATGTYYDRRCAT----
----NGGCATGTCTGGGCATGTNN

p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.74
Offset:6
Orientation:forward strand
Alignment:GHNNARACATGTYYDRRCAT
------ACATGCCCGGGCAT

PH0086.1_Irx5/Jaspar

Match Rank:7
Score:0.73
Offset:1
Orientation:forward strand
Alignment:GHNNARACATGTYYDRRCAT
-AATATACATGTAAAATT--

PH0085.1_Irx4/Jaspar

Match Rank:8
Score:0.71
Offset:1
Orientation:forward strand
Alignment:GHNNARACATGTYYDRRCAT
-AATATACATGTAAAACA--

PH0082.1_Irx2/Jaspar

Match Rank:9
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:GHNNARACATGTYYDRRCAT
ANTNTTACATGTATNTA---

PH0084.1_Irx3_2/Jaspar

Match Rank:10
Score:0.69
Offset:1
Orientation:forward strand
Alignment:GHNNARACATGTYYDRRCAT
-AATATACATGTAATATA--