Information for motif10


Reverse Opposite:

p-value:1e-21
log p-value:-4.909e+01
Information Content per bp:1.399
Number of Target Sequences with motif37.0
Percentage of Target Sequences with motif13.91%
Number of Background Sequences with motif3.9
Percentage of Background Sequences with motif2.26%
Average Position of motif in Targets27.0 +/- 8.3bp
Average Position of motif in Background24.7 +/- 1.7bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0003.1_Ascl2_1/Jaspar

Match Rank:1
Score:0.44
Offset:2
Orientation:reverse strand
Alignment:YSMNAGAGGMKCTBBHSHVD
--NNNNAGCAGCTGCTGAN-

GATA-IR3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:2
Score:0.44
Offset:-4
Orientation:forward strand
Alignment:----YSMNAGAGGMKCTBBHSHVD
NNNNNBAGATAWYATCTVHN----

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:3
Score:0.43
Offset:1
Orientation:forward strand
Alignment:YSMNAGAGGMKCTBBHSHVD
-ADGGYAGYAGCATCT----

PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:4
Score:0.42
Offset:4
Orientation:forward strand
Alignment:YSMNAGAGGMKCTBBHSHVD
----AGAGGAAGTG------

ETS:RUNX/Jurkat-RUNX1-ChIP-Seq(GSE17954)/Homer

Match Rank:5
Score:0.41
Offset:4
Orientation:forward strand
Alignment:YSMNAGAGGMKCTBBHSHVD
----ACAGGATGTGGT----

MA0080.3_Spi1/Jaspar

Match Rank:6
Score:0.40
Offset:0
Orientation:forward strand
Alignment:YSMNAGAGGMKCTBBHSHVD
AAAAAGAGGAAGTGA-----

MA0036.2_GATA2/Jaspar

Match Rank:7
Score:0.40
Offset:2
Orientation:reverse strand
Alignment:YSMNAGAGGMKCTBBHSHVD
--NCAGATAAGAANNN----

MA0035.3_Gata1/Jaspar

Match Rank:8
Score:0.40
Offset:2
Orientation:reverse strand
Alignment:YSMNAGAGGMKCTBBHSHVD
--ANAGATAAGAA-------

MA0467.1_Crx/Jaspar

Match Rank:9
Score:0.40
Offset:3
Orientation:forward strand
Alignment:YSMNAGAGGMKCTBBHSHVD
---AAGAGGATTAG------

MyoD(HLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:10
Score:0.40
Offset:4
Orientation:reverse strand
Alignment:YSMNAGAGGMKCTBBHSHVD
----NNAGCAGCTGCT----