Information for motif11


Reverse Opposite:

p-value:1e-16
log p-value:-3.813e+01
Information Content per bp:1.680
Number of Target Sequences with motif27.0
Percentage of Target Sequences with motif10.15%
Number of Background Sequences with motif2.4
Percentage of Background Sequences with motif1.41%
Average Position of motif in Targets23.9 +/- 13.1bp
Average Position of motif in Background28.4 +/- 4.2bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.28
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0002.1_Arid5a_1/Jaspar

Match Rank:1
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--TTYGAATATT--
NNTNNCAATATTAG

CHR/Cell-Cycle-Exp/Homer

Match Rank:2
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:TTYGAATATT
TTTGAAACCG

Oct4(POU/Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:3
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-TTYGAATATT
ATTTGCATAA-

Oct2(POU/Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:4
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-TTYGAATATT
ATTTGCATAT-

MA0507.1_POU2F2/Jaspar

Match Rank:5
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----TTYGAATATT
TTCATTTGCATAT-

PB0194.1_Zbtb12_2/Jaspar

Match Rank:6
Score:0.64
Offset:-5
Orientation:forward strand
Alignment:-----TTYGAATATT
TATCATTAGAACGCT

PH0144.1_Pou2f2/Jaspar

Match Rank:7
Score:0.64
Offset:-5
Orientation:reverse strand
Alignment:-----TTYGAATATT-
TNTAATTTGCATANNN

PB0079.1_Sry_1/Jaspar

Match Rank:8
Score:0.63
Offset:-5
Orientation:forward strand
Alignment:-----TTYGAATATT-
TATAATTATAATATTC

PH0145.1_Pou2f3/Jaspar

Match Rank:9
Score:0.62
Offset:-5
Orientation:reverse strand
Alignment:-----TTYGAATATT-
TNTAATTTGCATACNA

PB0174.1_Sox30_2/Jaspar

Match Rank:10
Score:0.61
Offset:-5
Orientation:reverse strand
Alignment:-----TTYGAATATT-
NCGTATTATAATCNTA