Information for motif12


Reverse Opposite:

p-value:1e-15
log p-value:-3.571e+01
Information Content per bp:1.530
Number of Target Sequences with motif20.0
Percentage of Target Sequences with motif7.52%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.96%
Average Position of motif in Targets26.0 +/- 11.2bp
Average Position of motif in Background18.4 +/- 2.2bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:1
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--AGTGCATTTG
NNTGTGGATTSS

MA0019.1_Ddit3::Cebpa/Jaspar

Match Rank:2
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---AGTGCATTTG
GGGATTGCATNN-

MA0479.1_FOXH1/Jaspar

Match Rank:3
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:AGTGCATTTG-
TGTGGATTNNN

PB0091.1_Zbtb3_1/Jaspar

Match Rank:4
Score:0.61
Offset:-6
Orientation:forward strand
Alignment:------AGTGCATTTG-
AATCGCACTGCATTCCG

MA0122.1_Nkx3-2/Jaspar

Match Rank:5
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---AGTGCATTTG
TTAAGTGGA----

MA0464.1_Bhlhe40/Jaspar

Match Rank:6
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:AGTGCATTTG--
-NTGCACGTGAG

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:7
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---AGTGCATTTG
TTAAGTGCTT---

PB0171.1_Sox18_2/Jaspar

Match Rank:8
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--AGTGCATTTG----
GGACTGAATTCATGCC

PB0146.1_Mafk_2/Jaspar

Match Rank:9
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-AGTGCATTTG----
CCTTGCAATTTTTNN

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:10
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---AGTGCATTTG
TTGAGTGSTT---