Information for motif13


Reverse Opposite:

p-value:1e-14
log p-value:-3.364e+01
Information Content per bp:1.631
Number of Target Sequences with motif25.0
Percentage of Target Sequences with motif9.40%
Number of Background Sequences with motif2.1
Percentage of Background Sequences with motif1.20%
Average Position of motif in Targets25.3 +/- 11.7bp
Average Position of motif in Background28.5 +/- 5.8bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.11
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:1
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:GTTGTACCAG-
-TTGCAACATN

PH0048.1_Hoxa13/Jaspar

Match Rank:2
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--GTTGTACCAG----
ANATTTTACGAGNNNN

PB0195.1_Zbtb3_2/Jaspar

Match Rank:3
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:GTTGTACCAG------
NNNNTGCCAGTGATTG

Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer

Match Rank:4
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:GTTGTACCAG
ATTGCATCAK

Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer

Match Rank:5
Score:0.60
Offset:0
Orientation:forward strand
Alignment:GTTGTACCAG
ATTGCATCAT

MA0092.1_Hand1::Tcfe2a/Jaspar

Match Rank:6
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:GTTGTACCAG---
---ATGCCAGACN

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:7
Score:0.59
Offset:1
Orientation:forward strand
Alignment:GTTGTACCAG-
-HTTTCCCASG

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:8
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:GTTGTACCAG-
-CTGTTCCTGG

CEBP(bZIP)/CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:9
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:GTTGTACCAG
GTTGCGCAAT

MA0152.1_NFATC2/Jaspar

Match Rank:10
Score:0.58
Offset:2
Orientation:forward strand
Alignment:GTTGTACCAG
--TTTTCCA-