Information for motif4


Reverse Opposite:

p-value:1e-36
log p-value:-8.381e+01
Information Content per bp:1.714
Number of Target Sequences with motif36.0
Percentage of Target Sequences with motif13.53%
Number of Background Sequences with motif1.3
Percentage of Background Sequences with motif0.78%
Average Position of motif in Targets24.5 +/- 12.8bp
Average Position of motif in Background38.0 +/- 6.2bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:1
Score:0.74
Offset:-1
Orientation:forward strand
Alignment:-YTSTTGCRAS
NATGTTGCAA-

GFX(?)/Promoter/Homer

Match Rank:2
Score:0.74
Offset:-1
Orientation:forward strand
Alignment:-YTSTTGCRAS-
ATTCTCGCGAGA

ZBTB33(Zf)/GM12878-ZBTB33-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-YTSTTGCRAS----
GTTCTCGCGAGANCC

MA0527.1_ZBTB33/Jaspar

Match Rank:4
Score:0.69
Offset:0
Orientation:forward strand
Alignment:YTSTTGCRAS-----
CTCTCGCGAGATCTG

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:YTSTTGCRAS--
CTGTTGCTAGGS

MA0510.1_RFX5/Jaspar

Match Rank:6
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-YTSTTGCRAS----
NCTGTTGCCAGGGAG

PB0145.1_Mafb_2/Jaspar

Match Rank:7
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---YTSTTGCRAS--
ANATTTTTGCAANTN

PB0055.1_Rfx4_1/Jaspar

Match Rank:8
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-YTSTTGCRAS----
NNCGTTGCTATGGNN

PB0054.1_Rfx3_1/Jaspar

Match Rank:9
Score:0.62
Offset:-5
Orientation:reverse strand
Alignment:-----YTSTTGCRAS--------
NTNNNNNGTTGCTANGGNNCANA

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:10
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:YTSTTGCRAS
--CTTGGCAA