Information for motif5


Reverse Opposite:

p-value:1e-35
log p-value:-8.194e+01
Information Content per bp:1.431
Number of Target Sequences with motif44.0
Percentage of Target Sequences with motif16.54%
Number of Background Sequences with motif3.0
Percentage of Background Sequences with motif1.74%
Average Position of motif in Targets25.4 +/- 9.8bp
Average Position of motif in Background26.4 +/- 6.3bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0498.1_Meis1/Jaspar

Match Rank:1
Score:0.52
Offset:10
Orientation:forward strand
Alignment:TCTYTYKTSAAGCTGBCACA-----
----------AGCTGTCACTCACCT

MA0500.1_Myog/Jaspar

Match Rank:2
Score:0.51
Offset:6
Orientation:reverse strand
Alignment:TCTYTYKTSAAGCTGBCACA
------NNGCAGCTGTC---

PH0169.1_Tgif1/Jaspar

Match Rank:3
Score:0.51
Offset:6
Orientation:reverse strand
Alignment:TCTYTYKTSAAGCTGBCACA---
------NNNCAGCTGTCAATATN

MA0499.1_Myod1/Jaspar

Match Rank:4
Score:0.51
Offset:7
Orientation:forward strand
Alignment:TCTYTYKTSAAGCTGBCACA
-------TGCAGCTGTCCCT

MA0521.1_Tcf12/Jaspar

Match Rank:5
Score:0.51
Offset:6
Orientation:reverse strand
Alignment:TCTYTYKTSAAGCTGBCACA
------NNGCAGCTGTT---

PH0170.1_Tgif2/Jaspar

Match Rank:6
Score:0.50
Offset:6
Orientation:forward strand
Alignment:TCTYTYKTSAAGCTGBCACA--
------AACTAGCTGTCAATAC

SCL(HLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:7
Score:0.50
Offset:9
Orientation:reverse strand
Alignment:TCTYTYKTSAAGCTGBCACA
---------CAGCTGNT---

MA0100.2_Myb/Jaspar

Match Rank:8
Score:0.50
Offset:8
Orientation:forward strand
Alignment:TCTYTYKTSAAGCTGBCACA
--------CCAACTGCCA--

MA0522.1_Tcf3/Jaspar

Match Rank:9
Score:0.50
Offset:6
Orientation:reverse strand
Alignment:TCTYTYKTSAAGCTGBCACA
------NTGCAGCTGTG---

PH0102.1_Meis1/Jaspar

Match Rank:10
Score:0.49
Offset:6
Orientation:forward strand
Alignment:TCTYTYKTSAAGCTGBCACA--
------AACGAGCTGTCAATAC