Information for motif6


Reverse Opposite:

p-value:1e-33
log p-value:-7.727e+01
Information Content per bp:1.631
Number of Target Sequences with motif34.0
Percentage of Target Sequences with motif12.78%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif1.11%
Average Position of motif in Targets27.9 +/- 13.6bp
Average Position of motif in Background29.2 +/- 9.8bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

POL009.1_DCE_S_II/Jaspar

Match Rank:1
Score:0.66
Offset:3
Orientation:reverse strand
Alignment:TKGTGCAGSW
---CACAGN-

MA0522.1_Tcf3/Jaspar

Match Rank:2
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:TKGTGCAGSW---
--NTGCAGCTGTG

SA0001.1_at_AC_acceptor/Jaspar

Match Rank:3
Score:0.62
Offset:-9
Orientation:forward strand
Alignment:---------TKGTGCAGSW-
TTTTTTTTTTTTTTCAGGTT

SA0002.1_at_AC_acceptor/Jaspar

Match Rank:4
Score:0.61
Offset:-9
Orientation:forward strand
Alignment:---------TKGTGCAGSW-
TTTTTTTTTTTTTTCAGGTT

POL008.1_DCE_S_I/Jaspar

Match Rank:5
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:TKGTGCAGSW
---NGAAGC-

E2A-nearPU.1(HLH)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:6
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:TKGTGCAGSW---
---NNCAGGTGNN

PB0091.1_Zbtb3_1/Jaspar

Match Rank:7
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--TKGTGCAGSW-----
NNNANTGCAGTGCNNTT

E2A(HLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer

Match Rank:8
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:TKGTGCAGSW----
----GCAGCTGTNN

PB0003.1_Ascl2_1/Jaspar

Match Rank:9
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-TKGTGCAGSW------
NNNNAGCAGCTGCTGAN

CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:10
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--TKGTGCAGSW
NATGTTGCAA--