p-value: | 1e-23 |
log p-value: | -5.400e+01 |
Information Content per bp: | 1.597 |
Number of Target Sequences with motif | 44.0 |
Percentage of Target Sequences with motif | 16.54% |
Number of Background Sequences with motif | 4.9 |
Percentage of Background Sequences with motif | 2.85% |
Average Position of motif in Targets | 27.7 +/- 11.3bp |
Average Position of motif in Background | 32.4 +/- 2.9bp |
Strand Bias (log2 ratio + to - strand density) | 0.2 |
Multiplicity (# of sites on avg that occur together) | 1.06 |
Motif File: | file (matrix) reverse opposite |
PDF Format Logos: | forward logo reverse opposite |
ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer
Match Rank: | 1 |
Score: | 0.78 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | CAGGCCTTGA -AGGCCTNG- |
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Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer
Match Rank: | 2 |
Score: | 0.75 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | CAGGCCTTGA- -TGACCTTGAN |
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ZNF711(Zf)/SH-SY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer
Match Rank: | 3 |
Score: | 0.74 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | CAGGCCTTGA -AGGCCTAG- |
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MA0505.1_Nr5a2/Jaspar
Match Rank: | 4 |
Score: | 0.73 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -CAGGCCTTGA---- GCTGACCTTGAACTN |
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Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer
Match Rank: | 5 |
Score: | 0.70 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | CAGGCCTTGA- -TGACCTTGAV |
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MA0146.2_Zfx/Jaspar
Match Rank: | 6 |
Score: | 0.67 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | CAGGCCTTGA---- CAGGCCNNGGCCNN |
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RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer
Match Rank: | 7 |
Score: | 0.66 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | CAGGCCTTGA--- -TGACCTTGACCT |
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Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer
Match Rank: | 8 |
Score: | 0.61 |
Offset: | 3 |
Orientation: | reverse strand |
Alignment: | CAGGCCTTGA--- ---CCTTTGATGT |
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MA0141.2_Esrrb/Jaspar
Match Rank: | 9 |
Score: | 0.60 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | CAGGCCTTGA--- -TGACCTTGANNN |
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PB0014.1_Esrra_1/Jaspar
Match Rank: | 10 |
Score: | 0.58 |
Offset: | -4 |
Orientation: | reverse strand |
Alignment: | ----CAGGCCTTGA--- NNNNATGACCTTGANTN |
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