Information for motif9


Reverse Opposite:

p-value:1e-21
log p-value:-5.002e+01
Information Content per bp:1.914
Number of Target Sequences with motif32.0
Percentage of Target Sequences with motif12.03%
Number of Background Sequences with motif2.4
Percentage of Background Sequences with motif1.38%
Average Position of motif in Targets23.9 +/- 11.8bp
Average Position of motif in Background26.6 +/- 5.0bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0200.1_Zfp187_2/Jaspar

Match Rank:1
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--AGCCCTGTCC----
GAGCCCTTGTCCCTAA

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:2
Score:0.62
Offset:4
Orientation:reverse strand
Alignment:AGCCCTGTCC----
----CTGTTCCTGG

PB0099.1_Zfp691_1/Jaspar

Match Rank:3
Score:0.62
Offset:-6
Orientation:reverse strand
Alignment:------AGCCCTGTCC-
NNNNTGAGCACTGTNNG

POL009.1_DCE_S_II/Jaspar

Match Rank:4
Score:0.61
Offset:3
Orientation:forward strand
Alignment:AGCCCTGTCC
---GCTGTG-

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:5
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--AGCCCTGTCC
CNAGGCCT----

POL010.1_DCE_S_III/Jaspar

Match Rank:6
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-AGCCCTGTCC
CAGCC------

Sp1(Zf)/Promoter/Homer

Match Rank:7
Score:0.56
Offset:0
Orientation:forward strand
Alignment:AGCCCTGTCC--
GGCCCCGCCCCC

ZNF711(Zf)/SH-SY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:8
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--AGCCCTGTCC
CTAGGCCT----

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:9
Score:0.55
Offset:0
Orientation:forward strand
Alignment:AGCCCTGTCC--
TGACCTTTNCNT

RXR(NR/DR1)/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:10
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:AGCCCTGTCC----
TGACCTTTGCCCTA