Information for motif13


Reverse Opposite:

p-value:1e-45
log p-value:-1.042e+02
Information Content per bp:1.750
Number of Target Sequences with motif151.0
Percentage of Target Sequences with motif6.04%
Number of Background Sequences with motif5.6
Percentage of Background Sequences with motif1.66%
Average Position of motif in Targets24.6 +/- 12.0bp
Average Position of motif in Background22.4 +/- 4.2bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

POL009.1_DCE_S_II/Jaspar

Match Rank:1
Score:0.69
Offset:3
Orientation:reverse strand
Alignment:AAATGCAGCA
---CACAGN-

POL010.1_DCE_S_III/Jaspar

Match Rank:2
Score:0.68
Offset:5
Orientation:forward strand
Alignment:AAATGCAGCA
-----CAGCC

PB0207.1_Zic3_2/Jaspar

Match Rank:3
Score:0.68
Offset:0
Orientation:forward strand
Alignment:AAATGCAGCA-----
GAGCACAGCAGGACA

PB0206.1_Zic2_2/Jaspar

Match Rank:4
Score:0.65
Offset:0
Orientation:forward strand
Alignment:AAATGCAGCA-----
CCACACAGCAGGAGA

PB0205.1_Zic1_2/Jaspar

Match Rank:5
Score:0.64
Offset:0
Orientation:forward strand
Alignment:AAATGCAGCA-----
CCACACAGCAGGAGA

PB0091.1_Zbtb3_1/Jaspar

Match Rank:6
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--AAATGCAGCA-----
NNNANTGCAGTGCNNTT

MA0483.1_Gfi1b/Jaspar

Match Rank:7
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-AAATGCAGCA
AAATCACAGCA

MA0496.1_MAFK/Jaspar

Match Rank:8
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-AAATGCAGCA----
CTGAGTCAGCAATTT

PH0157.1_Rhox11_1/Jaspar

Match Rank:9
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---AAATGCAGCA----
TCNNTTTACAGCGNNNT

Tcf12(HLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.59
Offset:4
Orientation:forward strand
Alignment:AAATGCAGCA----
----NCAGCTGCTG