Information for motif15


Reverse Opposite:

p-value:1e-40
log p-value:-9.413e+01
Information Content per bp:1.895
Number of Target Sequences with motif128.0
Percentage of Target Sequences with motif5.12%
Number of Background Sequences with motif4.6
Percentage of Background Sequences with motif1.37%
Average Position of motif in Targets28.0 +/- 11.7bp
Average Position of motif in Background41.2 +/- 1.9bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski et al.)/Homer

Match Rank:1
Score:0.72
Offset:3
Orientation:forward strand
Alignment:SAAGCTGTGG---
---GCTGTGGTTT

POL009.1_DCE_S_II/Jaspar

Match Rank:2
Score:0.71
Offset:3
Orientation:forward strand
Alignment:SAAGCTGTGG
---GCTGTG-

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:3
Score:0.68
Offset:2
Orientation:reverse strand
Alignment:SAAGCTGTGG----
--NNHTGTGGTTWN

MA0522.1_Tcf3/Jaspar

Match Rank:4
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--SAAGCTGTGG
NTGCAGCTGTG-

MA0002.2_RUNX1/Jaspar

Match Rank:5
Score:0.68
Offset:2
Orientation:forward strand
Alignment:SAAGCTGTGG---
--GTCTGTGGTTT

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:6
Score:0.66
Offset:4
Orientation:reverse strand
Alignment:SAAGCTGTGG----
----CTGTGGTTTN

MyoG(HLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer

Match Rank:7
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:SAAGCTGTGG
-CAGCTGTT-

MA0521.1_Tcf12/Jaspar

Match Rank:8
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--SAAGCTGTGG
NNGCAGCTGTT-

ETS:RUNX/Jurkat-RUNX1-ChIP-Seq(GSE17954)/Homer

Match Rank:9
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-SAAGCTGTGG-
ACAGGATGTGGT

MA0500.1_Myog/Jaspar

Match Rank:10
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--SAAGCTGTGG
NNGCAGCTGTC-