Information for motif18


Reverse Opposite:

p-value:1e-30
log p-value:-7.104e+01
Information Content per bp:1.530
Number of Target Sequences with motif112.0
Percentage of Target Sequences with motif4.48%
Number of Background Sequences with motif4.8
Percentage of Background Sequences with motif1.42%
Average Position of motif in Targets23.6 +/- 12.0bp
Average Position of motif in Background14.5 +/- 5.7bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.01
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0160.1_Rfxdc2_2/Jaspar

Match Rank:1
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----TTGGAGACTT---
CTACTTGGATACGGAAT

PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer

Match Rank:2
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--TTGGAGACTT
GGTTAGAGACCT

PB0158.1_Rfx3_2/Jaspar

Match Rank:3
Score:0.58
Offset:-8
Orientation:forward strand
Alignment:--------TTGGAGACTT-----
ACTGACCCTTGGTTACCACAAAG

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma et al.)/Homer

Match Rank:4
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-TTGGAGACTT
AATGGAAAAT-

PB0042.1_Mafk_1/Jaspar

Match Rank:5
Score:0.55
Offset:-5
Orientation:forward strand
Alignment:-----TTGGAGACTT
TAAAAATGCTGACTT

PB0041.1_Mafb_1/Jaspar

Match Rank:6
Score:0.54
Offset:-4
Orientation:forward strand
Alignment:----TTGGAGACTT---
AAATTTGCTGACTTAGA

MA0056.1_MZF1_1-4/Jaspar

Match Rank:7
Score:0.54
Offset:1
Orientation:forward strand
Alignment:TTGGAGACTT
-TGGGGA---

MA0124.1_NKX3-1/Jaspar

Match Rank:8
Score:0.53
Offset:4
Orientation:forward strand
Alignment:TTGGAGACTT-
----ATACTTA

MA0152.1_NFATC2/Jaspar

Match Rank:9
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:TTGGAGACTT
-TGGAAAA--

MA0161.1_NFIC/Jaspar

Match Rank:10
Score:0.53
Offset:0
Orientation:forward strand
Alignment:TTGGAGACTT
TTGGCA----