Information for motif19


Reverse Opposite:

p-value:1e-26
log p-value:-6.137e+01
Information Content per bp:1.530
Number of Target Sequences with motif119.0
Percentage of Target Sequences with motif4.76%
Number of Background Sequences with motif5.2
Percentage of Background Sequences with motif1.54%
Average Position of motif in Targets25.1 +/- 11.6bp
Average Position of motif in Background19.5 +/- 9.1bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0189.1_Tcfap2a_2/Jaspar

Match Rank:1
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-AGCCCACTGG---
NTGCCCANNGGTNA

PB0191.1_Tcfap2c_2/Jaspar

Match Rank:2
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-AGCCCACTGG---
CCGCCCAAGGGCAG

MA0461.1_Atoh1/Jaspar

Match Rank:3
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:AGCCCACTGG
-GCCATCTG-

PB0091.1_Zbtb3_1/Jaspar

Match Rank:4
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-AGCCCACTGG------
AATCGCACTGCATTCCG

NFY(CCAAT)/Promoter/Homer

Match Rank:5
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:AGCCCACTGG--
--CCGATTGGCT

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.59
Offset:-6
Orientation:forward strand
Alignment:------AGCCCACTGG----
CNNBRGCGCCCCCTGSTGGC

Egr2/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer

Match Rank:7
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--AGCCCACTGG
YCCGCCCACGCN

PB0196.1_Zbtb7b_2/Jaspar

Match Rank:8
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----AGCCCACTGG---
CATAAGACCACCATTAC

MA0155.1_INSM1/Jaspar

Match Rank:9
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:AGCCCACTGG--
CGCCCCCTGACA

PH0171.1_Nkx2-1/Jaspar

Match Rank:10
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-AGCCCACTGG-----
TAAGCCACTTGAAATT