Information for motif23


Reverse Opposite:

p-value:1e-18
log p-value:-4.366e+01
Information Content per bp:1.530
Number of Target Sequences with motif128.0
Percentage of Target Sequences with motif5.12%
Number of Background Sequences with motif7.9
Percentage of Background Sequences with motif2.34%
Average Position of motif in Targets25.4 +/- 13.1bp
Average Position of motif in Background27.0 +/- 8.3bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.01
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0103.2_ZEB1/Jaspar

Match Rank:1
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--AGACCTGAGA
CCTCACCTG---

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:2
Score:0.59
Offset:0
Orientation:forward strand
Alignment:AGACCTGAGA
AGGCCTNG--

E2A-nearPU.1(HLH)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:3
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-AGACCTGAGA
NNCACCTGNN-

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:4
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:AGACCTGAGA---
---CSTGGGAAAD

PH0140.1_Pknox1/Jaspar

Match Rank:5
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--AGACCTGAGA----
AAAGACCTGTCAATCC

PB0138.1_Irf4_2/Jaspar

Match Rank:6
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:AGACCTGAGA-----
GNNACCGAGAATNNN

PB0060.1_Smad3_1/Jaspar

Match Rank:7
Score:0.55
Offset:-7
Orientation:forward strand
Alignment:-------AGACCTGAGA
CAAATCCAGACATCACA

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:8
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:AGACCTGAGA
TGACCT----

Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer

Match Rank:9
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-AGACCTGAGA-
GWAAYHTGABMC

PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:10
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-AGACCTGAGA-
CGGAAGTGAAAC