Information for motif24


Reverse Opposite:

p-value:1e-17
log p-value:-4.117e+01
Information Content per bp:1.333
Number of Target Sequences with motif42.0
Percentage of Target Sequences with motif1.68%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets26.2 +/- 9.6bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Sp1(Zf)/Promoter/Homer

Match Rank:1
Score:0.47
Offset:0
Orientation:reverse strand
Alignment:VVVVVNKSVVVVVVVVVVVV
GGGGGCGGGGCC--------

MA0079.3_SP1/Jaspar

Match Rank:2
Score:0.45
Offset:0
Orientation:reverse strand
Alignment:VVVVVNKSVVVVVVVVVVVV
GGGGGCGGGGC---------

MA0162.2_EGR1/Jaspar

Match Rank:3
Score:0.45
Offset:3
Orientation:reverse strand
Alignment:VVVVVNKSVVVVVVVVVVVV
---GGCGGGGGCGGGGG---

MA0516.1_SP2/Jaspar

Match Rank:4
Score:0.44
Offset:4
Orientation:reverse strand
Alignment:VVVVVNKSVVVVVVVVVVVV
----GGGNGGGGGCGGGGC-

MA0163.1_PLAG1/Jaspar

Match Rank:5
Score:0.44
Offset:6
Orientation:forward strand
Alignment:VVVVVNKSVVVVVVVVVVVV
------GGGGCCCAAGGGGG

PB0101.1_Zic1_1/Jaspar

Match Rank:6
Score:0.43
Offset:-1
Orientation:forward strand
Alignment:-VVVVVNKSVVVVVVVVVVVV
CACCCCCGGGGGGG-------

MA0469.1_E2F3/Jaspar

Match Rank:7
Score:0.43
Offset:0
Orientation:reverse strand
Alignment:VVVVVNKSVVVVVVVVVVVV
NNGTGNGGGCGGGAG-----

MA0024.2_E2F1/Jaspar

Match Rank:8
Score:0.43
Offset:5
Orientation:forward strand
Alignment:VVVVVNKSVVVVVVVVVVVV
-----CGGGCGGGAGG----

PB0103.1_Zic3_1/Jaspar

Match Rank:9
Score:0.42
Offset:-1
Orientation:forward strand
Alignment:-VVVVVNKSVVVVVVVVVVVV
CCCCCCCGGGGGGGT------

PB0102.1_Zic2_1/Jaspar

Match Rank:10
Score:0.42
Offset:-1
Orientation:forward strand
Alignment:-VVVVVNKSVVVVVVVVVVVV
CCCCCCCGGGGGGGT------