Information for motif25


Reverse Opposite:

p-value:1e-14
log p-value:-3.265e+01
Information Content per bp:1.316
Number of Target Sequences with motif37.0
Percentage of Target Sequences with motif1.48%
Number of Background Sequences with motif2.0
Percentage of Background Sequences with motif0.58%
Average Position of motif in Targets24.6 +/- 8.7bp
Average Position of motif in Background29.0 +/- 4.5bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0523.1_TCF7L2/Jaspar

Match Rank:1
Score:0.48
Offset:5
Orientation:forward strand
Alignment:NNNNNNNNNNNNNNDDNNNN
-----AAAGATCAAAGGAA-

Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer

Match Rank:2
Score:0.46
Offset:7
Orientation:forward strand
Alignment:NNNNNNNNNNNNNNDDNNNN
-------ACATCAAAGGNA-

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:3
Score:0.45
Offset:7
Orientation:forward strand
Alignment:NNNNNNNNNNNNNNDDNNNN
-------ACATCAAAGG---

PB0083.1_Tcf7_1/Jaspar

Match Rank:4
Score:0.44
Offset:4
Orientation:forward strand
Alignment:NNNNNNNNNNNNNNDDNNNN-
----TATAGATCAAAGGAAAA

PB0084.1_Tcf7l2_1/Jaspar

Match Rank:5
Score:0.43
Offset:4
Orientation:reverse strand
Alignment:NNNNNNNNNNNNNNDDNNNN-
----NNNAGATCAAAGGANNN

TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer

Match Rank:6
Score:0.43
Offset:7
Orientation:forward strand
Alignment:NNNNNNNNNNNNNNDDNNNN
-------ACWTCAAAGG---

PB0040.1_Lef1_1/Jaspar

Match Rank:7
Score:0.43
Offset:4
Orientation:reverse strand
Alignment:NNNNNNNNNNNNNNDDNNNN-
----NANAGATCAAAGGGNNN

PB0082.1_Tcf3_1/Jaspar

Match Rank:8
Score:0.43
Offset:4
Orientation:forward strand
Alignment:NNNNNNNNNNNNNNDDNNNN-
----TATAGATCAAAGGAAAA

MA0484.1_HNF4G/Jaspar

Match Rank:9
Score:0.42
Offset:5
Orientation:forward strand
Alignment:NNNNNNNNNNNNNNDDNNNN
-----AGAGTCCAAAGTCCA

PB0061.1_Sox11_1/Jaspar

Match Rank:10
Score:0.41
Offset:4
Orientation:forward strand
Alignment:NNNNNNNNNNNNNNDDNNNN-
----ATAAGAACAAAGGACTA