Information for motif3


Reverse Opposite:

p-value:1e-130
log p-value:-3.011e+02
Information Content per bp:1.321
Number of Target Sequences with motif145.0
Percentage of Target Sequences with motif5.80%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.53%
Average Position of motif in Targets25.3 +/- 8.8bp
Average Position of motif in Background32.3 +/- 7.3bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.01
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0103.1_Zic3_1/Jaspar

Match Rank:1
Score:0.61
Offset:4
Orientation:forward strand
Alignment:NNNNBNBNNSNNGNSNRNKB
----CCCCCCCGGGGGGGT-

PB0101.1_Zic1_1/Jaspar

Match Rank:2
Score:0.61
Offset:4
Orientation:forward strand
Alignment:NNNNBNBNNSNNGNSNRNKB
----CACCCCCGGGGGGG--

PB0102.1_Zic2_1/Jaspar

Match Rank:3
Score:0.59
Offset:4
Orientation:forward strand
Alignment:NNNNBNBNNSNNGNSNRNKB
----CCCCCCCGGGGGGGT-

Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.56
Offset:12
Orientation:forward strand
Alignment:NNNNBNBNNSNNGNSNRNKB
------------GGGGGGGG

MA0599.1_KLF5/Jaspar

Match Rank:5
Score:0.55
Offset:11
Orientation:reverse strand
Alignment:NNNNBNBNNSNNGNSNRNKB-
-----------GGGGNGGGGC

MA0039.2_Klf4/Jaspar

Match Rank:6
Score:0.52
Offset:11
Orientation:forward strand
Alignment:NNNNBNBNNSNNGNSNRNKB-
-----------TGGGTGGGGC

PB0097.1_Zfp281_1/Jaspar

Match Rank:7
Score:0.50
Offset:9
Orientation:reverse strand
Alignment:NNNNBNBNNSNNGNSNRNKB----
---------GGGGGGGGGGGGGGA

MA0154.2_EBF1/Jaspar

Match Rank:8
Score:0.50
Offset:6
Orientation:reverse strand
Alignment:NNNNBNBNNSNNGNSNRNKB
------TCCCTGGGGAN---

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:9
Score:0.49
Offset:6
Orientation:reverse strand
Alignment:NNNNBNBNNSNNGNSNRNKB
------TCCCCTGGGGAC--

KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer

Match Rank:10
Score:0.49
Offset:11
Orientation:forward strand
Alignment:NNNNBNBNNSNNGNSNRNKB-
-----------DGGGYGKGGC