Information for motif6


Reverse Opposite:

p-value:1e-103
log p-value:-2.385e+02
Information Content per bp:1.551
Number of Target Sequences with motif158.0
Percentage of Target Sequences with motif6.32%
Number of Background Sequences with motif2.4
Percentage of Background Sequences with motif0.72%
Average Position of motif in Targets26.1 +/- 12.5bp
Average Position of motif in Background8.4 +/- 3.0bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.10
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0146.2_Zfx/Jaspar

Match Rank:1
Score:0.67
Offset:-5
Orientation:forward strand
Alignment:-----CCCGGACTGG
GGGGCCGAGGCCTG-

p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:2
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---CCCGGACTGG-
ATGCCCGGGCATGT

ZNF711(Zf)/SH-SY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:3
Score:0.62
Offset:2
Orientation:forward strand
Alignment:CCCGGACTGG
--AGGCCTAG

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:4
Score:0.61
Offset:2
Orientation:forward strand
Alignment:CCCGGACTGG
--CTGTCTGG

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:5
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:CCCGGACTGG
CNAGGCCT--

MA0092.1_Hand1::Tcfe2a/Jaspar

Match Rank:6
Score:0.60
Offset:3
Orientation:forward strand
Alignment:CCCGGACTGG---
---GGTCTGGCAT

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:7
Score:0.57
Offset:0
Orientation:forward strand
Alignment:CCCGGACTGG
VBSYGTCTGG

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:8
Score:0.56
Offset:2
Orientation:forward strand
Alignment:CCCGGACTGG
--TWGTCTGV

PB0103.1_Zic3_1/Jaspar

Match Rank:9
Score:0.54
Offset:-4
Orientation:forward strand
Alignment:----CCCGGACTGG-
CCCCCCCGGGGGGGT

PB0060.1_Smad3_1/Jaspar

Match Rank:10
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--CCCGGACTGG-----
NNTNNTGTCTGGNNTNG