Information for motif8


Reverse Opposite:

p-value:1e-67
log p-value:-1.557e+02
Information Content per bp:1.530
Number of Target Sequences with motif122.0
Percentage of Target Sequences with motif4.88%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.86%
Average Position of motif in Targets25.8 +/- 11.7bp
Average Position of motif in Background30.8 +/- 3.7bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:1
Score:0.69
Offset:3
Orientation:reverse strand
Alignment:GCACTGTGCC---
---CTGTTCCTGG

PB0099.1_Zfp691_1/Jaspar

Match Rank:2
Score:0.65
Offset:-7
Orientation:reverse strand
Alignment:-------GCACTGTGCC
NNNNTGAGCACTGTNNG

NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:3
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----GCACTGTGCC--
CTTGGCANNNTGCCAA

MA0119.1_TLX1::NFIC/Jaspar

Match Rank:4
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---GCACTGTGCC-
TTGGCATGGTGCCA

POL009.1_DCE_S_II/Jaspar

Match Rank:5
Score:0.61
Offset:2
Orientation:forward strand
Alignment:GCACTGTGCC
--GCTGTG--

PB0199.1_Zfp161_2/Jaspar

Match Rank:6
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--GCACTGTGCC--
NNGCNCTGCGCGGC

MA0114.2_HNF4A/Jaspar

Match Rank:7
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--GCACTGTGCC---
CTGGACTTTGGACTC

HNF4a(NR/DR1)/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:8
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-GCACTGTGCC-----
TGGACTTTGNNCTNTG

MA0484.1_HNF4G/Jaspar

Match Rank:9
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-GCACTGTGCC----
TGGACTTTGNNCTCN

RXR(NR/DR1)/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:10
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-GCACTGTGCC---
TGACCTTTGCCCTA