Information for motif12


Reverse Opposite:

p-value:1e-29
log p-value:-6.806e+01
Information Content per bp:1.617
Number of Target Sequences with motif60.0
Percentage of Target Sequences with motif22.39%
Number of Background Sequences with motif5.5
Percentage of Background Sequences with motif3.91%
Average Position of motif in Targets25.0 +/- 13.4bp
Average Position of motif in Background24.9 +/- 7.6bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MyoG(HLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer

Match Rank:1
Score:0.76
Offset:0
Orientation:reverse strand
Alignment:CAGCTATTGC
CAGCTGTT--

MyoD(HLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:2
Score:0.75
Offset:-2
Orientation:forward strand
Alignment:--CAGCTATTGC
AGCAGCTGCTNN

Myf5(bHLH)/GM-Myf5-ChIP-Seq(GSE24852)/Homer

Match Rank:3
Score:0.74
Offset:-1
Orientation:reverse strand
Alignment:-CAGCTATTGC
ACAGCTGTTV-

MA0521.1_Tcf12/Jaspar

Match Rank:4
Score:0.73
Offset:-3
Orientation:reverse strand
Alignment:---CAGCTATTGC
NNGCAGCTGTT--

Tcf12(HLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:5
Score:0.73
Offset:-1
Orientation:forward strand
Alignment:-CAGCTATTGC
NCAGCTGCTG-

MA0499.1_Myod1/Jaspar

Match Rank:6
Score:0.72
Offset:-2
Orientation:forward strand
Alignment:--CAGCTATTGC-
TGCAGCTGTCCCT

MA0500.1_Myog/Jaspar

Match Rank:7
Score:0.71
Offset:-3
Orientation:reverse strand
Alignment:---CAGCTATTGC
NNGCAGCTGTC--

Ap4(HLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:8
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-CAGCTATTGC
HCAGCTGDTN-

Ptf1a(HLH)/Panc1-Ptf1a-ChIP-Seq(GSE47459)/Homer

Match Rank:9
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-CAGCTATTGC
ACAGCTGTTN-

PB0003.1_Ascl2_1/Jaspar

Match Rank:10
Score:0.66
Offset:-6
Orientation:reverse strand
Alignment:------CAGCTATTGC-
NNNNAGCAGCTGCTGAN