Information for motif13


Reverse Opposite:

p-value:1e-28
log p-value:-6.655e+01
Information Content per bp:1.553
Number of Target Sequences with motif54.0
Percentage of Target Sequences with motif20.15%
Number of Background Sequences with motif4.1
Percentage of Background Sequences with motif2.91%
Average Position of motif in Targets28.2 +/- 13.3bp
Average Position of motif in Background24.9 +/- 6.7bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0114.1_Egr1_2/Jaspar

Match Rank:1
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-CCAGAGAGGG-----
TGCGGAGTGGGACTGG

PB0140.1_Irf6_2/Jaspar

Match Rank:2
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---CCAGAGAGGG--
NNNACCGAGAGTNNN

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:CCAGAGAGGG
CCAGACAG--

PB0060.1_Smad3_1/Jaspar

Match Rank:4
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----CCAGAGAGGG--
CAAATCCAGACATCACA

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:5
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:CCAGAGAGGG
CCAGACRSVB

MA0092.1_Hand1::Tcfe2a/Jaspar

Match Rank:6
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---CCAGAGAGGG
ATGCCAGACN---

MA0503.1_Nkx2-5_(var.2)/Jaspar

Match Rank:7
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:CCAGAGAGGG-
CTTGAGTGGCT

MA0083.2_SRF/Jaspar

Match Rank:8
Score:0.56
Offset:-5
Orientation:forward strand
Alignment:-----CCAGAGAGGG---
CATGCCCAAATAAGGCAA

MA0599.1_KLF5/Jaspar

Match Rank:9
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:CCAGAGAGGG--
--GGGGNGGGGC

PB0107.1_Ascl2_2/Jaspar

Match Rank:10
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-CCAGAGAGGG-----
NATNGGGNGGGGANAN