Information for motif14


Reverse Opposite:

p-value:1e-15
log p-value:-3.455e+01
Information Content per bp:1.537
Number of Target Sequences with motif33.0
Percentage of Target Sequences with motif12.31%
Number of Background Sequences with motif3.5
Percentage of Background Sequences with motif2.46%
Average Position of motif in Targets25.0 +/- 11.2bp
Average Position of motif in Background28.9 +/- 4.6bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0091.1_Zbtb3_1/Jaspar

Match Rank:1
Score:0.74
Offset:-3
Orientation:reverse strand
Alignment:---AMTGCAGTNC----
NNNANTGCAGTGCNNTT

CTCF-SatelliteElement/CD4+-CTCF-ChIP-Seq(Barski et al.)/Homer

Match Rank:2
Score:0.62
Offset:2
Orientation:forward strand
Alignment:AMTGCAGTNC------------
--TGCAGTTCCNNNNNTGGCCA

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:3
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:AMTGCAGTNC--
--TTAAGTGCTT

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:4
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:AMTGCAGTNC-
-CTYRAGTGSY

PB0099.1_Zfp691_1/Jaspar

Match Rank:5
Score:0.56
Offset:0
Orientation:forward strand
Alignment:AMTGCAGTNC-------
CGAACAGTGCTCACTAT

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:6
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:AMTGCAGTNC--
--TTGAGTGSTT

MA0122.1_Nkx3-2/Jaspar

Match Rank:7
Score:0.55
Offset:2
Orientation:forward strand
Alignment:AMTGCAGTNC-
--TTAAGTGGA

PB0152.1_Nkx3-1_2/Jaspar

Match Rank:8
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-AMTGCAGTNC------
ACTCCAAGTACTTGGAA

PH0117.1_Nkx3-1/Jaspar

Match Rank:9
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-AMTGCAGTNC------
NATTTAAGTACTTANNA

PH0116.1_Nkx2-9/Jaspar

Match Rank:10
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-AMTGCAGTNC------
NATTTAAGTACTTNAAA