Information for motif4


Reverse Opposite:

p-value:1e-85
log p-value:-1.964e+02
Information Content per bp:1.386
Number of Target Sequences with motif84.0
Percentage of Target Sequences with motif31.34%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif1.76%
Average Position of motif in Targets25.4 +/- 11.7bp
Average Position of motif in Background37.6 +/- 1.1bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF711(Zf)/SH-SY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:1
Score:0.71
Offset:1
Orientation:forward strand
Alignment:SCGGCCCGGC
-AGGCCTAG-

MA0146.2_Zfx/Jaspar

Match Rank:2
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:SCGGCCCGGC----
CAGGCCNNGGCCNN

MA0597.1_THAP1/Jaspar

Match Rank:3
Score:0.64
Offset:1
Orientation:forward strand
Alignment:SCGGCCCGGC
-CTGCCCGCA

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:4
Score:0.63
Offset:1
Orientation:forward strand
Alignment:SCGGCCCGGC
-AGGCCTNG-

POL006.1_BREu/Jaspar

Match Rank:5
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:SCGGCCCGGC
--GGCGCGCT

PB0153.1_Nr2f2_2/Jaspar

Match Rank:6
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---SCGGCCCGGC---
NNNNTGACCCGGCGCG

MA0516.1_SP2/Jaspar

Match Rank:7
Score:0.60
Offset:2
Orientation:forward strand
Alignment:SCGGCCCGGC-------
--GCCCCGCCCCCTCCC

Sp1(Zf)/Promoter/Homer

Match Rank:8
Score:0.60
Offset:1
Orientation:forward strand
Alignment:SCGGCCCGGC---
-GGCCCCGCCCCC

PB0010.1_Egr1_1/Jaspar

Match Rank:9
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-SCGGCCCGGC---
TCCGCCCCCGCATT

PB0164.1_Smad3_2/Jaspar

Match Rank:10
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-SCGGCCCGGC------
TACGCCCCGCCACTCTG