Information for motif10


Reverse Opposite:

p-value:1e-94
log p-value:-2.166e+02
Information Content per bp:1.578
Number of Target Sequences with motif74.0
Percentage of Target Sequences with motif4.75%
Number of Background Sequences with motif1.2
Percentage of Background Sequences with motif0.13%
Average Position of motif in Targets25.2 +/- 9.7bp
Average Position of motif in Background9.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

POL011.1_XCPE1/Jaspar

Match Rank:1
Score:0.54
Offset:8
Orientation:forward strand
Alignment:AGCHCCGSSRSGSGGACCYC
--------GGGCGGGACC--

POL013.1_MED-1/Jaspar

Match Rank:2
Score:0.52
Offset:12
Orientation:reverse strand
Alignment:AGCHCCGSSRSGSGGACCYC
------------CGGAGC--

PB0052.1_Plagl1_1/Jaspar

Match Rank:3
Score:0.51
Offset:7
Orientation:forward strand
Alignment:AGCHCCGSSRSGSGGACCYC---
-------TTGGGGGCGCCCCTAG

REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer

Match Rank:4
Score:0.49
Offset:-2
Orientation:reverse strand
Alignment:--AGCHCCGSSRSGSGGACCYC
TCAGCACCATGGACAGCTCC--

MA0138.2_REST/Jaspar

Match Rank:5
Score:0.48
Offset:-3
Orientation:forward strand
Alignment:---AGCHCCGSSRSGSGGACCYC
TTCAGCACCATGGACAGCGCC--

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:6
Score:0.47
Offset:13
Orientation:reverse strand
Alignment:AGCHCCGSSRSGSGGACCYC
-------------TGACCT-

PB0156.1_Plagl1_2/Jaspar

Match Rank:7
Score:0.47
Offset:8
Orientation:reverse strand
Alignment:AGCHCCGSSRSGSGGACCYC-----
--------NNNNGGTACCCCCCANN

Sp1(Zf)/Promoter/Homer

Match Rank:8
Score:0.47
Offset:7
Orientation:reverse strand
Alignment:AGCHCCGSSRSGSGGACCYC
-------GGGGGCGGGGCC-

PB0102.1_Zic2_1/Jaspar

Match Rank:9
Score:0.47
Offset:1
Orientation:forward strand
Alignment:AGCHCCGSSRSGSGGACCYC
-CCCCCCCGGGGGGGT----

PB0101.1_Zic1_1/Jaspar

Match Rank:10
Score:0.46
Offset:3
Orientation:reverse strand
Alignment:AGCHCCGSSRSGSGGACCYC
---CCCCCCCGGGGGNN---