Information for motif13


Reverse Opposite:

p-value:1e-75
log p-value:-1.732e+02
Information Content per bp:1.617
Number of Target Sequences with motif76.0
Percentage of Target Sequences with motif4.88%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif0.28%
Average Position of motif in Targets25.2 +/- 12.4bp
Average Position of motif in Background16.1 +/- 7.3bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0059.1_MYC::MAX/Jaspar

Match Rank:1
Score:0.66
Offset:0
Orientation:forward strand
Alignment:AAMAACGCGG-
GACCACGTGGT

c-Myc(HLH)/LNCAP-cMyc-ChIP-Seq(unpublished)/Homer

Match Rank:2
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:AAMAACGCGG-
---CACGTGGN

MA0133.1_BRCA1/Jaspar

Match Rank:3
Score:0.60
Offset:1
Orientation:forward strand
Alignment:AAMAACGCGG
-ACAACAC--

MA0147.2_Myc/Jaspar

Match Rank:4
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:AAMAACGCGG
AAGCACATGG

n-Myc(HLH)/mES-nMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:5
Score:0.60
Offset:0
Orientation:forward strand
Alignment:AAMAACGCGG
NNCCACGTGG

PB0131.1_Gmeb1_2/Jaspar

Match Rank:6
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--AAMAACGCGG----
TNAACGACGTCGNCCA

MA0104.3_Mycn/Jaspar

Match Rank:7
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:AAMAACGCGG-
---CACGTGGC

c-Myc/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:8
Score:0.57
Offset:0
Orientation:forward strand
Alignment:AAMAACGCGG
NNCCACGTGG

Max(HLH)/K562-Max-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-AAMAACGCGG-
NNACCACGTGGT

MA0006.1_Arnt::Ahr/Jaspar

Match Rank:10
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:AAMAACGCGG
---CACGCA-