Information for motif18


Reverse Opposite:

p-value:1e-57
log p-value:-1.325e+02
Information Content per bp:1.695
Number of Target Sequences with motif63.0
Percentage of Target Sequences with motif4.04%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif0.28%
Average Position of motif in Targets29.4 +/- 13.1bp
Average Position of motif in Background24.2 +/- 6.1bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0164.1_Smad3_2/Jaspar

Match Rank:1
Score:0.74
Offset:-6
Orientation:forward strand
Alignment:------CCGCCACTAG-
TACGCCCCGCCACTCTG

MA0079.3_SP1/Jaspar

Match Rank:2
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---CCGCCACTAG
GCCCCGCCCCC--

PB0110.1_Bcl6b_2/Jaspar

Match Rank:3
Score:0.66
Offset:-4
Orientation:forward strand
Alignment:----CCGCCACTAG--
ATCCCCGCCCCTAAAA

MA0516.1_SP2/Jaspar

Match Rank:4
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---CCGCCACTAG--
GCCCCGCCCCCTCCC

PB0202.1_Zfp410_2/Jaspar

Match Rank:5
Score:0.65
Offset:-5
Orientation:forward strand
Alignment:-----CCGCCACTAG--
TCACCCCGCCCCAAATT

POL003.1_GC-box/Jaspar

Match Rank:6
Score:0.64
Offset:-5
Orientation:reverse strand
Alignment:-----CCGCCACTAG
NAGCCCCGCCCCCN-

Sp1(Zf)/Promoter/Homer

Match Rank:7
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----CCGCCACTAG
GGCCCCGCCCCC--

PB0201.1_Zfp281_2/Jaspar

Match Rank:8
Score:0.61
Offset:-6
Orientation:forward strand
Alignment:------CCGCCACTAG-
AGGAGACCCCCAATTTG

MA0130.1_ZNF354C/Jaspar

Match Rank:9
Score:0.61
Offset:1
Orientation:forward strand
Alignment:CCGCCACTAG
-ATCCAC---

PB0113.1_E2F3_2/Jaspar

Match Rank:10
Score:0.61
Offset:-6
Orientation:forward strand
Alignment:------CCGCCACTAG-
AGCTCGGCGCCAAAAGC