Information for motif19


Reverse Opposite:

p-value:1e-26
log p-value:-6.077e+01
Information Content per bp:1.542
Number of Target Sequences with motif49.0
Percentage of Target Sequences with motif3.15%
Number of Background Sequences with motif4.0
Percentage of Background Sequences with motif0.41%
Average Position of motif in Targets24.3 +/- 14.2bp
Average Position of motif in Background21.1 +/- 5.1bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0506.1_NRF1/Jaspar

Match Rank:1
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:TGCGCAGGTT-
TGCGCAGGCGC

E2A-nearPU.1(HLH)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:2
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:TGCGCAGGTT--
--NNCAGGTGNN

PB0044.1_Mtf1_1/Jaspar

Match Rank:3
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----TGCGCAGGTT--
NNTTTGCACACGGCCC

MA0103.2_ZEB1/Jaspar

Match Rank:4
Score:0.63
Offset:4
Orientation:reverse strand
Alignment:TGCGCAGGTT---
----CAGGTGAGG

POL009.1_DCE_S_II/Jaspar

Match Rank:5
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:TGCGCAGGTT
--CACAGN--

PB0089.1_Tcfe2a_1/Jaspar

Match Rank:6
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-TGCGCAGGTT------
ATCCACAGGTGCGAAAA

NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer

Match Rank:7
Score:0.62
Offset:-5
Orientation:reverse strand
Alignment:-----TGCGCAGGTT
GCGCATGCGCAG---

MA0048.1_NHLH1/Jaspar

Match Rank:8
Score:0.57
Offset:1
Orientation:forward strand
Alignment:TGCGCAGGTT---
-GCGCAGCTGCGT

NRF1/Promoter/Homer

Match Rank:9
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-TGCGCAGGTT-
GTGCGCATGCGC

MA0131.1_HINFP/Jaspar

Match Rank:10
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:TGCGCAGGTT-
-GCGGACGTTN