Information for motif2


Reverse Opposite:

p-value:1e-165
log p-value:-3.822e+02
Information Content per bp:1.614
Number of Target Sequences with motif114.0
Percentage of Target Sequences with motif7.32%
Number of Background Sequences with motif1.3
Percentage of Background Sequences with motif0.14%
Average Position of motif in Targets26.1 +/- 11.8bp
Average Position of motif in Background28.0 +/- 11.1bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0003.2_TFAP2A/Jaspar

Match Rank:1
Score:0.69
Offset:-5
Orientation:forward strand
Alignment:-----CCYCGGGGCC
CATTGCCTCAGGGCA

PB0086.1_Tcfap2b_1/Jaspar

Match Rank:2
Score:0.69
Offset:-3
Orientation:forward strand
Alignment:---CCYCGGGGCC-
TTGCCCTAGGGCAT

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-CCYCGGGGCC-
GCCTCAGGGCAT

n-Myc(HLH)/mES-nMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:4
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:CCYCGGGGCC
CCACGTGGNN

PB0189.1_Tcfap2a_2/Jaspar

Match Rank:5
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---CCYCGGGGCC-
TCACCTCTGGGCAG

MA0524.1_TFAP2C/Jaspar

Match Rank:6
Score:0.65
Offset:-5
Orientation:forward strand
Alignment:-----CCYCGGGGCC
CATGGCCCCAGGGCA

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:7
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-CCYCGGGGCC-
TCCCCTGGGGAC

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:8
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-CCYCGGGGCC-
SCCTSAGGSCAW

MA0163.1_PLAG1/Jaspar

Match Rank:9
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--CCYCGGGGCC--
CCCCCTTGGGCCCC

EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer

Match Rank:10
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-CCYCGGGGCC-
TCCCNNGGGACN