Information for motif3


Reverse Opposite:

p-value:1e-164
log p-value:-3.778e+02
Information Content per bp:1.579
Number of Target Sequences with motif113.0
Percentage of Target Sequences with motif7.25%
Number of Background Sequences with motif0.7
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets25.3 +/- 9.3bp
Average Position of motif in Background35.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0162.2_EGR1/Jaspar

Match Rank:1
Score:0.66
Offset:5
Orientation:forward strand
Alignment:CSSCGCCGSCGCCGCCCCSS
-----CCCCCGCCCCCGCC-

Sp1(Zf)/Promoter/Homer

Match Rank:2
Score:0.63
Offset:7
Orientation:forward strand
Alignment:CSSCGCCGSCGCCGCCCCSS
-------GGCCCCGCCCCC-

MA0516.1_SP2/Jaspar

Match Rank:3
Score:0.61
Offset:5
Orientation:forward strand
Alignment:CSSCGCCGSCGCCGCCCCSS
-----GCCCCGCCCCCTCCC

MA0079.3_SP1/Jaspar

Match Rank:4
Score:0.61
Offset:8
Orientation:forward strand
Alignment:CSSCGCCGSCGCCGCCCCSS
--------GCCCCGCCCCC-

POL003.1_GC-box/Jaspar

Match Rank:5
Score:0.59
Offset:6
Orientation:reverse strand
Alignment:CSSCGCCGSCGCCGCCCCSS
------NAGCCCCGCCCCCN

PB0097.1_Zfp281_1/Jaspar

Match Rank:6
Score:0.59
Offset:4
Orientation:forward strand
Alignment:CSSCGCCGSCGCCGCCCCSS
----TCCCCCCCCCCCCCC-

PB0202.1_Zfp410_2/Jaspar

Match Rank:7
Score:0.55
Offset:6
Orientation:forward strand
Alignment:CSSCGCCGSCGCCGCCCCSS---
------TCACCCCGCCCCAAATT

PB0076.1_Sp4_1/Jaspar

Match Rank:8
Score:0.55
Offset:4
Orientation:forward strand
Alignment:CSSCGCCGSCGCCGCCCCSS-
----GGTCCCGCCCCCTTCTC

PB0010.1_Egr1_1/Jaspar

Match Rank:9
Score:0.55
Offset:7
Orientation:forward strand
Alignment:CSSCGCCGSCGCCGCCCCSS-
-------TCCGCCCCCGCATT

Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.54
Offset:5
Orientation:reverse strand
Alignment:CSSCGCCGSCGCCGCCCCSS
-----CCCCCCCC-------