Information for motif5


Reverse Opposite:

p-value:1e-129
log p-value:-2.990e+02
Information Content per bp:1.629
Number of Target Sequences with motif137.0
Percentage of Target Sequences with motif8.79%
Number of Background Sequences with motif4.4
Percentage of Background Sequences with motif0.45%
Average Position of motif in Targets22.8 +/- 12.2bp
Average Position of motif in Background33.9 +/- 9.8bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Sp1(Zf)/Promoter/Homer

Match Rank:1
Score:0.77
Offset:-2
Orientation:reverse strand
Alignment:--GGGCSCGGCC
GGGGGCGGGGCC

MA0039.2_Klf4/Jaspar

Match Rank:2
Score:0.72
Offset:-1
Orientation:forward strand
Alignment:-GGGCSCGGCC
TGGGTGGGGC-

KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer

Match Rank:3
Score:0.72
Offset:-1
Orientation:forward strand
Alignment:-GGGCSCGGCC
DGGGYGKGGC-

PB0039.1_Klf7_1/Jaspar

Match Rank:4
Score:0.72
Offset:-4
Orientation:reverse strand
Alignment:----GGGCSCGGCC--
NNAGGGGCGGGGTNNA

MA0599.1_KLF5/Jaspar

Match Rank:5
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-GGGCSCGGCC
GGGGNGGGGC-

MA0146.2_Zfx/Jaspar

Match Rank:6
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--GGGCSCGGCC--
GGGGCCGAGGCCTG

POL011.1_XCPE1/Jaspar

Match Rank:7
Score:0.68
Offset:0
Orientation:forward strand
Alignment:GGGCSCGGCC
GGGCGGGACC

POL003.1_GC-box/Jaspar

Match Rank:8
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---GGGCSCGGCC-
AGGGGGCGGGGCTG

MA0079.3_SP1/Jaspar

Match Rank:9
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--GGGCSCGGCC
GGGGGCGGGGC-

MA0516.1_SP2/Jaspar

Match Rank:10
Score:0.64
Offset:-6
Orientation:reverse strand
Alignment:------GGGCSCGGCC
GGGNGGGGGCGGGGC-